NONHSAT031424
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031424 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1281 nt |
Genomic location |
chr12-:121784598..121790130 |
Exon number |
2 |
Exons |
121784598..121785684,121789937..121790130 |
Genome context |
|
Sequence |
000001 ACGAGAGCCT CTACTTCAAT CCCATGATGA CCAATGGGGT TGTGCACGCC AATGTGTTCG GCATCAAGGA CTGGGTGACG 000080
000081 CCGTACAAGA TCGCGGTGCT GGTGCTGCTG AACGAGATGA GCCGCACAGG CGAGGGCGCC GTCAGCCTCA TGGAGCGGCG 000160 000161 GAGGCTCAAC CAGCTGCTCC TGCCCCTGCT GCAGGGCCCA GATATTACAC TGTCAAAACT TTACAAGTTA ATTGAAGAGT 000240 000241 CTTGTCCACA GCTGGCAAAT TCAGTGCAGA TCAGGTAAAC TTCATTTTCT TCTTTATATA TGAAAAGGTG TGAAGGTAGA 000320 000321 TGAAAATCAC AAAAGGGTAT GTGGTAGTTA ATTCTTTTAA AAAGATACCT TTATTACCCT AGGTTGTTTT CCCAAGAGCC 000400 000401 TTTACTTAAT TCTGTTTTGT TGAAAAATGG ATAGCttttt ctttggagac agggtctcat tctgttgccc aggctggagt 000480 000481 acaatggtgc aatcagggct caacgcagcc tggacttcct gagctcaggt gatcttccca cctcagactc ccaagtagct 000560 000561 gggactacaa gcatacacca ccaaacctgg ctaatttttt gtatttttag tagagatggg attttgcttt gttgcctagg 000640 000641 ctggtcttga actcctgggc tcaagcaatc cctccgcttc cacctcgcaa agtgctggga ttacaagtgt gagcaaccgc 000720 000721 acctggcTGA AAAATGGGTA ACATTAAGCA TACTGTTTTA TAGCTTTTTT CCCCAAATTT TATTATTCCT TATGGATCCA 000800 000801 TCTTACTCTT TTTAGTCATT GCAGATAATT GAATGTTTAT TGGTTGATGT GATAGTTTGA CAAATTTTAT GATCAAGAAA 000880 000881 ACAACAATGA TACTTTTCAG AAATACGGGA GTAACATTTT GAATTATGAA GTTTGTTTTA TGAGCCACCA TTTTATACAA 000960 000961 ATCTCTGAAT TGCCTGTAAA ATACATTATT TGAGGTAATT GAGGAATATG AAACATGAGA AATTATTCAA AGGGCCTTTC 001040 001041 TAAAATATGC ACCTCGATTT TCTCATTCAG AATCAAACTG ATGGCTGAAG GCGAGTTGAA GGATATGGAA CAGTTTTTTG 001120 001121 ATGACCTTTC AGATTCTTTC TCTGGAACTG AACCAGAGGT TCACAAAACA AGTGTAGTAG GTATGAAACT CTTCTAAGAA 001200 001201 GAGCAGAGAG TATTTTCATT GAAGTGAGCA GCTTTCTAAG TCATGTCTAT CATTGTTCTG CTATATCTGT GAACAGACAC 001280 001281 A |
Predicted Small Protein
Name | NONHSAT031424_smProtein_23:277 |
Length | 85 |
Molecular weight | 9436.0773 |
Aromaticity | 0.047619047619 |
Instability index | 41.0345238095 |
Isoelectric point | 8.97723388672 |
Runs | 11 |
Runs residual | 0.0030330603579 |
Runs probability | 0.0497984615632 |
Amino acid sequence | MMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRLNQLLLPLLQGPD ITLSKLYKLIEESCPQLANSVQIR |
Secondary structure | LLLLLEEEELLLLLLLLLLHHHHEEEEHHHHLLLLLLLHHHHHHHHHHHHHHHHHHLLLL LLHHHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |