NONHSAT030330
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030330 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1067 nt |
Genomic location |
chr12+:102707353..102709939 |
Exon number |
2 |
Exons |
102707353..102707562,102709083..102709939 |
Genome context |
|
Sequence |
000001 aggcaatgcg tcaccctgct tcggctcgcg cacggtgcgt gcacccactg acctgcgacc actgtctggc actccctagt 000080
000081 gagatgaacc ctgtacctca gatggaaatg cagaaatcac ccgtcttctg cgtcgctcat gctgggagct gtagactgga 000160 000161 gctgttccta ttcggccatc ttggctcttc ccccgtttta caatttaaag caccaggtaa agaccttcac aatcgggaac 000240 000241 ccgtagattg gatcttctga aaacatcaga gaaagactat ctttgccatc cacactacag taaaactttg gagccttgaa 000320 000321 ccttggattt ataatctcac aactgagaag ggtccctcca tactcctgga actgtacacc cattggaact cttaaggtaa 000400 000401 aactaaccag gaaagtttct ccccagaaaa agatggcatc cttgatgtga acagcttttc ccaagatcac aggtcaaaac 000480 000481 ttctactatc atgagactct tacctttgaa tatttttacc ttgtttatgc ctctatgagc aacagaaatg aaaagtgggt 000560 000561 ctataatgtg cacttatagg gtataatttt atttgtgaag gattttgcgg gaagccagcc ttatacataa ataaacttat 000640 000641 actttaatag ataaaagatg aaggcccaag gtgggtgaga aactttagtg gtacatatgt tgactcataa tcagtcaaaa 000720 000721 ctcctcttaa cccacatcat ggattaaaga gaacattgcc aggaggcctt cactcttcta gaaggacata atttgttagg 000800 000801 tcctttttcc atggtttaga atacaagagg caataattag aaatgtctcc ctcttaatag gcAtgggttc aaataaggca 000880 000881 aacgtggagc tgtagccaat ctcgctgttt gtgtacctca cttctgattc ctgtgtgtca ctttaacatt tttgtctata 000960 000961 cattttttct gaccaggaga cacccctgga gtctgtgaat ctgctgtgat tctgggggct gcccgaatca tgaatcattc 001040 001041 attgctcaat taaactcctt taagttt |
Predicted Small Protein
Name | NONHSAT030330_smProtein_5:259 |
Length | 85 |
Molecular weight | 9392.9019 |
Aromaticity | 0.0714285714286 |
Instability index | 56.4928571429 |
Isoelectric point | 7.72430419922 |
Runs | 15 |
Runs residual | 0.0445859872611 |
Runs probability | 0.0471824765943 |
Amino acid sequence | MRHPASARARCVHPLTCDHCLALPSEMNPVPQMEMQKSPVFCVAHAGSCRLELFLFGHLG SSPVLQFKAPGKDLHNREPVDWIF |
Secondary structure | LLLLHHHLLLLLLLLLLHHHHLLLLLLLLLLHHHEELLLEEEEELLLLLEEEHHHHHLLL LLLLEEEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |