NONHSAT030158
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT030158 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
1596 nt |
Genomic location |
chr12+:99127426..99129196 |
Exon number |
2 |
Exons |
99127426..99128623,99128799..99129196 |
Genome context |
|
Sequence |
000001 ggtcttgaac tcttggcctc aagtaatcct cctgcctcag cctcccaaag tgttgggatt gcagatatga gccactggcc 000080
000081 tggccTTCAG CAGTTCTTTT TGTGAAGTAA AACTTGTATG TTGGAAAGAG TAGATTTTAT TGGTCTACCC TTTTCTCACT 000160 000161 GTAGCTGCTG GCAGCCCTGT GCCATATCTG GACTCTAGTT GTCAGTATCT GAGTTGGACA CTATTCCTGC TCCCTCTTGT 000240 000241 TTCTTACATA TCAGACTTCT TACTTGAATG AAACCTGATC TTTCCTAATC CTCACTTTTT TCTTTTTTAA AAAGCAGTTT 000320 000321 CTCCACTGCT AAATGTTAGT CATTGAGGTG GGGCCAATTT TAATCATAAG CCTTAATAAG ATTTTTCTAA GAAATGTGAA 000400 000401 ATAGAACAAT TTTCATCTAA TTCCATTTAC TTTTAGATGA ATGGCATTGT GAATGCCATT CTTTTAATGA ATTTCAAGAG 000480 000481 AATTCTCTGG TTTTCTGTGT AATTCCAGAT GAGTCACTGT AACTCTAGAA GATTAACCTT CCAGCCAACC TAttttcctt 000560 000561 tcccttgtct ctctcatcct cttttccttc cttctttcct ttctcttctt ttatctccAA GGTTAATCAG GAAAAATAGC 000640 000641 TTTTGACAGG GGAAAAAACT CAATAACTAG CTATTTTTGA CCTCCTGATC AGGAACTTTA GTTGAAGCGT AAATCTAAAG 000720 000721 AAACATTTTC TCTGAAATAT ATTATTAAGG GCAATGGAGA TAAATTAATA GTAGATGTGG TTCCCAGAAA ATATAATCAA 000800 000801 AATTCAAAGA TTTTTTTTGT TTCTGTAACT GGAACTAAAT CAAATGATTA CTAGTGTTAA TAGTAGATAA CTTGTTTTTA 000880 000881 TTGTTGGTGC ATATTAGTAT AACTGTGGGG TAGGTCGGGG AGAGGGTAAG GGAATAGATC ACTCAGATGT ATTTTAGATA 000960 000961 AGCTATTTAG CCTTTGATGG AATCATAAAT ACAGTGAATA CAATCCTTTG CATTGTTAAG GAGGTTTTTT GTTTTTAAAT 001040 001041 GGTGGGTCAA GGAGCTAGTT TACAGGCTTA CTGTGATTTA AGCAAATGTG AAAAGTGAAA CCTTAATTTT ATCAAAAGAA 001120 001121 ATTTCTGTAA ATGGTATGTC TCCTTAGAAT ACCCAAATCA TAATTTTATT TGTACACACT GTTAGGGGCT CATCTCATga 001200 001201 ggattccttg agccctggag tttgagtcca gcctgggtga catagcaaga ccctgtctta aaagaaaaaT GGGAAGAAAG 001280 001281 ACAAGGTAAC ATGAAGAAAG AAGAGATACC TAGTATGATG GAGCTGCAAA TTTCATGGCA GTTCATGCAG TCGGTCAAGA 001360 001361 GGAGGATTTT GTTTTGTAGT TTGCAGATGA GCATTTCTAA AGCATTTTCC CTTGCTGTAT TTTTTTGTAT TATAAATTAC 001440 001441 ATTGGACTTC atatatataa ttttttttta cattatatGT CTCTTGTATG TTTTGAAACT CTTGTATTTA TGATATAGCT 001520 001521 TATATGATTT TTTTGCCTTG GTATACattt taaaatatga atttaaaaaa tttttgtaaa aataaaattC ACAAAA |
Predicted Small Protein
Name | NONHSAT030158_smProtein_332:403 |
Length | 24 |
Molecular weight | 2623.2898 |
Aromaticity | 0.0434782608696 |
Instability index | 52.4434782609 |
Isoelectric point | 9.99249267578 |
Runs | 7 |
Runs residual | 0.0766045548654 |
Runs probability | 0.0268882327706 |
Amino acid sequence | MLVIEVGPILIISLNKIFLRNVK |
Secondary structure | LEEEELLLEEEEELLHHHHHHLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLL |
PiMo | i?????????????????????? |