NONHSAT029443
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029443 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
852 nt |
Genomic location |
chr12-:72050663..72057140 |
Exon number |
3 |
Exons |
72050663..72051081,72054151..72054207,72056765..72057140 |
Genome context |
|
Sequence |
000001 GGAATTTCTC ACGCTCGCGG CACGCGTCTG AGCGGGGCCA CCTCAGGGGA CCCAGCAGCT ACCGACCCAA AGAACCGTTC 000080
000081 CGGTCTCATC CGCCTTCTGT ACGGATGCCT TCGAGCTCAC TGTCCGAAAG CAGTCCCCGG CCGTCTTTCT GGGAGCGGAG 000160 000161 CCACCTCGCC TTGGACCGTT TCCGCTTTCG AGGCAGGCCT TACCGGGGTG GGAGTCGCTG GAGTCGGGGG CGAGGAGTGG 000240 000241 GTGAGCGAGG AGGCAAGCCG GGGTGCAGAC CTCCTCTGGG AGGAGGAGCA GGATCCGGGT TCAGCAGCAG TCAGAGCTGG 000320 000321 CGAGAGCCCT CTCCACCTCG GAAGAGCTGT ATCCTTAACG TGGCGGTCGG CGCTGGATGC TGCACTTAAA AGGATGCTTG 000400 000401 TTTTGATGTC CTGCTCATTG TTTTCCCTAT GAACCAAAAG TTTTGGAAGG TCTCCATCAA GAAAACAAAA TTATTCATCA 000480 000481 AAAAATGAAA ACTGTGTGGA AGAAACTTTT GAAGATTTGC TTTTAAAGTA TAAACAAATA CAGTTGGAAC TAGAATGCAT 000560 000561 CAATAAGGAT GAAAAACTAG CATTGAGTAG CAAAGAAGAG AATGTGCAGG AAGATCCTAA AACATTGAAC TTCGAGGACC 000640 000641 AAACTAGCAC TGATAATGTC AGTATTACAA AGGATTCAAG TAAAGAAGTA GCTCCTGAGG AGAAAACACA AGTCAAAACT 000720 000721 TTTCAGGCAT TTGAATTAAA ACCACTCAGG CAAAAATTGA CTTTACCAGG AGATAAGAAC CGTTTGAAAA AAGTTAAAGA 000800 000801 TGGAGCAAAA CCACTTTCCC TGAAATCCGA CACTACTGAT TCTAGTCAAG GT |
Predicted Small Protein
Name | NONHSAT029443_smProtein_104:388 |
Length | 95 |
Molecular weight | 10052.1809 |
Aromaticity | 0.0851063829787 |
Instability index | 77.6840425532 |
Isoelectric point | 11.4567260742 |
Runs | 9 |
Runs residual | 0.0330712303423 |
Runs probability | 0.0158786237218 |
Amino acid sequence | MPSSSLSESSPRPSFWERSHLALDRFRFRGRPYRGGSRWSRGRGVGERGGKPGCRPPLGG GAGSGFSSSQSWREPSPPRKSCILNVAVGAGCCT |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLEEEEEEEELLLEEL |
PRMN | - |
PiMo | - |