NONHSAT029402
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029402 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
875 nt |
Genomic location |
chr12+:70704743..70724671 |
Exon number |
4 |
Exons |
70704743..70704797,70713078..70713144,70723203..70723350,70724067..70724671 |
Genome context |
|
Sequence |
000001 CGAAAACATG TACTACAGCC AGTCTTCTAT GTTTCCACAT CGGTCAGAAA AAGATATGCT GGCATCACCA TCTACATCAG 000080
000081 GTCAGCTGTC TCAGTTTGGG GCAAGTTTAT ACGGGCAACA AAGTGCACTA GGCCTTCCAA TGAGGGGGAT GAGCAACAAT 000160 000161 ACCCCTCAGT TAAATCGCAG CTTATCACAA GGCACTCAGT TACCGAGCCA CGTCACGCCA ACAACAGGGG TACCAACAAT 000240 000241 GTCACTTCAC ACGCCTCCAT CTCCAAGCAG GGGTATTTTG CCTATGAATC CTAGGAATAT GATGAACCAC TCCCAGGTTG 000320 000321 GTCAGGGCAT TGGAATTCCT AGCAGGACAA ATAGCATGAG CAGTTCAGGG TTAGGTAGCC CCAACAGAAG CTCGCCAAGC 000400 000401 ATAATATGTA TGCCAAAGCA GCAGCCTTCT CGACAGCCTT TTACTGTGAA CAGGTAAGAT GTTTATTGAT ACTGTGTATA 000480 000481 ATTGTCTTTC TGGGTATACT CAGATTTGCC TTTTCATATT TTCACTTTGT TCTTGAGGTG TGGCTTCTCT CTAATAAGTG 000560 000561 TGTTTCATCA TGCATTTATG TCCAAAGATT CTGTTACCCA TCACAAAACG ATACGTTTTC TTGAAAATCA GGTTGATTTT 000640 000641 GGAAAGCACA TTAAAACATT TTGTTGTTGT GGTTGTTAGA AAAGGATTGT TCTTGGATTC GCCACCAGGC AAATTTTGGT 000720 000721 TGATATGTCC TCTCTTTATA AAATAAGTTG ATTACCTGTG TGGTAAGAGT TCTAGGTTTA TGAATAGAAC TGGAGACATG 000800 000801 TTTGACTATT ACTACTTTGC TTTAGTTATA CTTTGAGTAC CTTCTCAAGT AAGATTTGGT TTTGTGCATT GGAGA |
Predicted Small Protein
Name | NONHSAT029402_smProtein_569:745 |
Length | 59 |
Molecular weight | 6819.4986 |
Aromaticity | 0.120689655172 |
Instability index | 48.2586206897 |
Isoelectric point | 10.2357788086 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0450209567857 |
Amino acid sequence | MHLCPKILLPITKRYVFLKIRLILESTLKHFVVVVVRKGLFLDSPPGKFWLICPLFIK |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHHLLLEEEEEEELLEEEELLLLLEEEEELLEEL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHH |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiTTTTTTTTTTTTTTTTTT |