NONHSAT028275

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT028275

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2510 nt

Genomic location

chr12+:51895612..51902980

Exon number

4

Exons

51895612..51896162,51897813..51897904,51899619..51899714,51901210..51902980

Genome context

Sequence
000001 gactttttaa taatagtcgt tctgactgat gtgaaatgga gtctctttgt ggttctgatt tgcatctctg atgatgcatg 000080
000081 atgttgacca gtttttaata tgtttgttga ctgcttgtat gtcttctttt aagaagtgtc tgttcatatc ctttgcccTT 000160
000161 TCGCttctat gcaccaataa cacccaggct gagagtcaaa ccaagaacac aatcctgact acagtagcca taaagaaaat 000240
000241 gaaatacctg ggaatacacc taatcaaaaa catgaaagca ctctctagag ggagaactac aaaacattgc tgaaagaaat 000320
000321 cagagatgaT TCTCTGAAAA AGAAGTCAGA TTAGAAATGA TTCTCTGAAA AAGAAATCAT CTCTGATTTC TTTCAGCAGT 000400
000401 GTGttttttg tttgtttgtt tgttttgaga cagagtcttg ctctgtcgcc aaggctggag ggcaatggca tgatttcagc 000480
000481 tcactacaac ctcctgctcc tgggttcgag cgattctcct acctcagcct cccgagtagc tgggattaca gGAGGCTGAG 000560
000561 AAAATGTTAG AAATTGGGGG AGACAAGTTT CCCTTAGAGA GCAGGAAGTT ACTAAGTAGT CCTGGAAAGA ACATCAGTTG 000640
000641 CAGATGTGAC CCCTCTGAGA TTAATATATC TGATGAAATG CCTAAAACTA CAGTTTGGAA AGCTCTCAGT ATGAATTCTG 000720
000721 GAAATGCAAA GGAAAAGAGT CTCTTCAACT AAGAGTCTTT GCTGGGATGG AAGATTTGGG CCGTGTGGTG CCTCAGGGAA 000800
000801 GTTCTGGTTA CAGAGAAAAT GGCGAGTCTC TCAGAGAAGA AGCAAGACCA AGTCTGGCCC TGTCCTTGGT CATCTCAAAG 000880
000881 CCATGCCGAA GCATTCAGTT ATTCTTGGTG TGCATTGGAA GGCATCCAGC TATCCCCATA CCAGCAGCCA GTCACCAGAT 000960
000961 GTGAATGTGG AAGCAGAAGA CCACCTCCTG TTGGTTCTTC TCCTCTTCCT TCTTTTTCTC TTTAGAACGG CCACCATTGA 001040
001041 AGACCTAGCT TCCCATTTTC CAGACGTTTT CTCTGAAATT CTCTGCTGGC CTGCCAAGCC ATATGGATTC ATTCTGCCAC 001120
001121 TGAGGAGTCC TTCAGTGAGG TCCCTCTTCC TAAAGGACAG AGTGGGGAGT AGGAGGGGAA CAGAGAGGAC ATCCTCTCTG 001200
001201 GCTCTCCAGT GCTCTTAGTG TCTACAGGCT CCTAGGCAGC CCTGGGCCTT GGTTTGATTA CCTCCCCTGG GGGATGCTGG 001280
001281 TCAGACCCAG AGGTTGTCAG GAGGTCAGCT ACCAGGAAGA TCCATGATCT GGGCATTGGC AGTGCCTGCC ACCACAGCCA 001360
001361 GGAAGATGCC TCTGACCTGG GTGCATCTCC ATCACTCCTT AGCAGCAGCC TGCATAACTG GCAAGAATCT TGGATGATAC 001440
001441 AAGAGCCAAG AAGGGACATT TGAGTTGTGT CGCTTAGATA GGAAAGGGAT CCAGGGAAAA TCAACAGTAA GTgaggatga 001520
001521 gcagtgtctc ttggttttca ttgaggatag agtaagagat tgagtttaga ttgcaacaga aggaattagt ttagatacca 001600
001601 ggaagaactt cctagccTGA AGATTTGTCA TAGTGTCTGC TTTCTAGATA TCTGGGAAAG ATTTGATAAT AGTTGTTTGT 001680
001681 GAATAGAAAG GAGGATATGA TGTTTTTATT GGCCATTTTG CGGGACTCTT CGACTTCTTG CTGCTGTCTC TTGAGGATAC 001760
001761 ATTCCAATTC CATCCTGGCG AGATCCAAGT GCTTACGTAC TGTCTCCTTA GCTGCCTTAG AGTAAACGAT CATCAGTTCA 001840
001841 ATGGACCAAA ATCACCTTCA GCCATGTGGT TTCTTCATCA TCATGGATTT CTTTTGGTTG ACAAACATTC TGGCTCTCAG 001920
001921 ATGCAAAAAG TCACACTGGG AAATGAACTG TAAGTGGTGA AATTAGTTTT GGTATTTAAT TTAAAACTAC ATTTATAGTT 002000
002001 TTTCTCTTCT CTTCTATGTT GCAATGAATG TAAAGTATTT GGGATCCAGT GCTTATAAAC CTTTCCTTCC TTTGTGCACA 002080
002081 GAATGTAACT AGCAAGCCCA TTAGCACCCA GATAATTCTA TCATGTTAGT TTCCCATCCT GGAAAATCTT TGTACAGTGG 002160
002161 GAAGTTCCCC GATGTGTTTT TCTTTCTTAG GTGAAGGGTT GGCTATATCA CTTTATTGAA TTTTGCATTC CTTAGACTTT 002240
002241 TAAAATATAC TAATGTATTC TAGTCTTACT CTAAAGACCT TTGATGTTAA AGGAATCCTT CATTTATTTC ATATTCCCTA 002320
002321 TCTCATAGGG CCACAATTAT TTTAATAcag agatgatttt caaaatattt taacaactgg tacaggacag atgccagcca 002400
002401 ctcagaaggg atgcctgctg taaacaagca gtatgtatgg ttgtaccaat gcctattggc tgaacattaT GCTACTTTCA 002480
002481 GATATTAAAA TGGTGTTCCT TTGAATCGTG
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Predicted Small Protein

Name NONHSAT028275_smProtein_818:1024
Length 69
Molecular weight 7542.4159
Aromaticity 0.102941176471
Instability index 88.3455882353
Isoelectric point 6.51873779297
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0475261357615
Amino acid sequence MASLSEKKQDQVWPCPWSSQSHAEAFSYSWCALEGIQLSPYQQPVTRCECGSRRPPPVGS
SPLPSFSL
Secondary structure LLLLLHHHLLLLLLLLLLLHHHHHHHLLHHHHHHLLEELLLLLLEEELLLLLLLLLLLLL
LLLLLLLL
PRMN -
PiMo -