NONHSAT028137

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT028137

Source

NONCODE4.0

Same with

,

Classification

sense

Length

484 nt

Genomic location

chr12+:50152919..50156877

Exon number

3

Exons

50152919..50153104,50155487..50155562,50156656..50156877

Genome context

Sequence
000001 AGTGACTATG AGCCAGAAAG TATGGCTGGT TTTTTTTTCT CTGCAACTTC TGCTGTATAG TAACTTCATC TCTTACATTT 000080
000081 GTTAGGCAAA CCTGTATGTG GGACTGGTGG TCATGTGTGG CTTCGTCCTT TTTGATACTC AACTCATTAT TGAAAAGGCC 000160
000161 GAACATGGAG ATCAAGATTA TATCTGGCAC TGCATTGATC TCTTCTTAGA TTTCATTACT GTCTTCAGAA AACTCATGAT 000240
000241 GATCCTGGCC ATGAATGAAA AGGATAAGAA GAAAGAGAAG AAATGAAGTG ACCATCCAGC CTTTCCCAAT TAGACTTCCT 000320
000321 CTCCTTCCAC CCCTCATTTC CTTTTTGCAC ACATTACAGG TGGTGTGTTC TGTGATAATG AAAAGCATCA GAAAAGCTTT 000400
000401 TGTACTTTGT GGTTTCCTCT ATTTTGAATT TTTTGATCAA AAAACTGATT AGCAGAATAT AGTTTGGAGT TTGGCTTCAT 000480
000481 CTTC
[back to top]

Predicted Small Protein

Name NONHSAT028137_smProtein_254:451
Length 66
Molecular weight 7796.3868
Aromaticity 0.123076923077
Instability index 60.4661538462
Isoelectric point 10.5951538086
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0265854089384
Amino acid sequence MKRIRRKRRNEVTIQPFPIRLPLLPPLISFLHTLQVVCSVIMKSIRKAFVLCGFLYFEFF
DQKTD
Secondary structure LLLLHHHLLLEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLEEEEEEE
ELLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooooooooooo
ooooo