NONHSAT028046
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT028046 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
873 nt |
Genomic location |
chr12-:49317025..49318571 |
Exon number |
3 |
Exons |
49317025..49317635,49318006..49318039,49318344..49318571 |
Genome context |
|
Sequence |
000001 CTGTTCCTTA CAGCGGTAAG GGGAACGCTA GGCTGCCGCA CTAAGGGGGC TGCCGCCGCC CAGCGGTCCA GGTGTGTGTT 000080
000081 GCGCGCCTGC TGGGAGGGAG AGGGTGCTAG ATGTATGCTC TTGATGCTCT CTCCCCCCAG GGAAGCTTGG TAGATGGACG 000160 000161 TATTATTGAC ACCTCCCTGA CCAGAGACCC TCTGGTTATA GAACTTGGCC AAAAGCAGGT GATTCCAGGT CTGGAGCAGA 000240 000241 GTCTTCTCGA CATGTGTGTG GGAGAGAAGC GAAGGGCAAT CATTCCTTCT CACTTGGCCT ATGGAAAACG GGGATTTCCA 000320 000321 CCATCTGTCC CAGGTAATCT GACTAGGACT CTCTCTCAGG CCATCAAAAT ACCCAGTCCC TAAGAGCTAT AAGGAGCTAT 000400 000401 ATACTTTGTT TGATGCTTGA GAAGATCCAG ACCAAGTTTG TTTAGACAGA TAGGAGTGGC TGGGGCCTCC ATCTACAGGG 000480 000481 CCACCTTTTT CCTCCTCATA TCACCAACAG GGACTAAAGA CAACCTGATG AGGCCACCTG GCATGACCTC CAGCAGCCAG 000560 000561 TAACTTGTTA GGGAAGAGAC CTGCTTGGGC CACATGGGTC TGCTGCCTGT GCCACCACCT TTCCCAGAAC ACTGGACTTC 000640 000641 TTTCCTGCCC TTTTCTACAA CTCTACGCTG TGTCAGCTGT ACAGCCACCC CCCACCCCTT CCTTTCAGCC TCCATCAGGG 000720 000721 AAGAGACAGT AAAAATAATC ACAGTCAAGT GATTCAAAAC AAAACAAAAA GCAACTGTTA AAGCCAAGTC TGCCCCATAA 000800 000801 CTTTAAAAGC CATCATTGGT CACTGCCGAT GTCTATTTTT GAAGGGTTGA GATGGACAGA TTTCCCAAGA TGC |
Predicted Small Protein
Name | NONHSAT028046_smProtein_110:382 |
Length | 91 |
Molecular weight | 9707.2184 |
Aromaticity | 0.0333333333333 |
Instability index | 56.7588888889 |
Isoelectric point | 8.97662353516 |
Runs | 15 |
Runs residual | 0.0268077601411 |
Runs probability | 0.0441500323853 |
Amino acid sequence | MYALDALSPQGSLVDGRIIDTSLTRDPLVIELGQKQVIPGLEQSLLDMCVGEKRRAIIPS HLAYGKRGFPPSVPGNLTRTLSQAIKIPSP |
Secondary structure | LLLLLLLLLLLLLLLLEEEELLLLLLLEEEEELLLLLLLLHHHHHHHHLLLLLLEEEEHH HHHHLLLLLLLLLLLLHHHLHHHHEELLLL |
PRMN | - |
PiMo | - |