NONHSAT027649

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT027649

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1977 nt

Genomic location

chr12+:34175408..34179087

Exon number

2

Exons

34175408..34177094,34178798..34179087

Genome context

Sequence
000001 CCGGTATGTG GCCCCGTCTG GCTAGTCCCG CCTAGCGCGC CCATTTCGAG CCCAAGTTTC CAGCTCGGGT TTCCAGGCTC 000080
000081 AGAATTTTCC AGGAGTAGGT TCTTGGGCAG TGGCTGTGGG AGCTGGAATG GCGCAGCTGG AAGGTTACTA TTTCTCGGCC 000160
000161 GCCTTGAGCT GTACCTTTTT AGTATCCTGC CTCCTCTTCT CCGCCTTCAG CCGGGCGTTG CGAGAGCCCT ACATGGACGA 000240
000241 GATCTTCCAC CTGCCTCAGG CGCAGCGCTA CTGTGAGGGC CATTTCTCCC TTTCCCAGGT GGGGTCCCCA ACCTGTCCCC 000320
000321 ACCCCAGGAG AGGCCTGAGA GGTCCCAGCG TCCCCACGTC CTCCCATCCT TAGACTTCAC TCGTCCTGTT CCACCCCCTC 000400
000401 AAGCCTCAGA ACATGAAAGA AACTGGGTAT AGTCTTTTGT TCCTGTCTCT GAGATCTGTG AAATATTTAT TAAATGAATG 000480
000481 AATAAACAGC AGATCTGTCC TCCAGGAAGG AGTGATCTGG GAGAATACTC AACGGGGAAC TGAGCCCTCC TCTTGGCAGC 000560
000561 TGACGATATC GATCCCACTT TGTCTTTCCT TGTTTTAGGA TTAAAGGCAT TCGGGTGCTC CTTGGAAATA CCAGAAAACT 000640
000641 TTCCTTTAGC TCACCTGTCA AGCACCTCAC TGTGCATTTT AGGGGTGGGA TAGGGTGGAC TGGAGGGATC TTCAGCTACC 000720
000721 AAAAAGTGAC AATTTATAAT CACAAATTCC TTCCCTGGGT ATTTTTAGTG AACTGTTAAC TGGATAAACT GGCAACCAGT 000800
000801 CAAGTCACAT CATTTTTGAG TATATATTTG ACTGTGCAAG TATGTACATA TAAATATCAA AATAAGCATC CCCTGCTTCT 000880
000881 CTGGTGACac aatatagggt actggctaga aatataaagt ctgttttaga gaaagatctg atcttaaatc ttggtgctgt 000960
000961 gatttactag ttttgtgatc ttggagatgt tctgagtttc agaaattcag gttactcatc tgcaaaatga caataatctt 001040
001041 tactataggg catattgtaa cgttaataca gagggtttgg caacaatttc tgtctcaGTT TATGTTAGCT GTCATCATGG 001120
001121 AGCCTGTGGT CCAAATGTTT TCCTAAACTT AAGAGTCCCA AACAATGTTT CCATGCTTTT AAAAACTGGA ACATTTGCAG 001200
001201 TTTATTTATC AAAATAAAGG CTTTTAAAGA ACATTTCTTG GAAAATAGAA ATAGATTTTA AGTTGTTGTT GTTTATTGGT 001280
001281 TGCTGCTACC TGAACCATCA CTAAGCTGGT CCGGGGGCAA AAAATAAGAA AAACGAATCC TGTTCTGCCA AGGACTTACT 001360
001361 TAATCTTGTC ATAGAATAAC TTCTCAAAAT TTCTGATTGT TGCTGGAGAT GAGACTTGGG CTTGACATAT TTGTGCCTGT 001440
001441 CTTGTTCCTA TTACCTCTTG CTTTTACTTC ATTTTCTTTC ATTTTAAAGT GGGATCCCAT GATTACTACA TTACCTGGCT 001520
001521 TGTACCTGGT GTCAATTGGA GTGATCAAAC CTGCCATTTG GATCTTTGGA TGGTCTGAAC ATGTTGTCTG CTCCATTGGG 001600
001601 ATGCTCAGAT TTGTTAATCT TCTCTTCAGT GTTGGCAACT TCTATTTACT ATATTTGCTT TTCTGCAAGG TACAACCCAG 001680
001681 AAACAAGGCT GCCTCAAGTA TCCAGAGAGT CTTGTCAACA TTAACACTAG CAGTATTTCC AACACTTTAT TTTTTTAACT 001760
001761 TCCTTTATTA TACAGAAGCA GGATCTATGT TTTTTACTCT TTTTGCGTAT TTGATGTGTC TTTATGGAAA TCATAAAACT 001840
001841 TCAGCCTTCC TTGGATTTTG TGGCTTCATG TTTCGGCAAA CAAATATCAT CTGGGCTGTC TTCTGTGCAG GAAATGTCAT 001920
001921 TGCACAAAAG TTAACGGAGG CTTGGAAAAC TGAGCTACAA AAGAAGGAAG ACAGACT
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Predicted Small Protein

Name NONHSAT027649_smProtein_1580:1723
Length 48
Molecular weight 5269.0172
Aromaticity 0.106382978723
Instability index 42.2085106383
Isoelectric point 6.50396728516
Runs 8
Runs residual 0.00393617021277
Runs probability 0.0759472708001
Amino acid sequence MLSAPLGCSDLLIFSSVLATSIYYICFSARYNPETRLPQVSRESCQH
Secondary structure LLLLLLLLLHHHHLHHHHHHHEEEEEEELLLLLLLLLLLLLHHHLLL
PRMN LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii