NONHSAT027419

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT027419

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

678 nt

Genomic location

chr12+:27199085..27219276

Exon number

4

Exons

27199085..27199165,27213760..27213926,27217209..27217429,27219068..27219276

Genome context

Sequence
000001 agacagggtc tcgctttgcc acacaggctg gagtgcaatg gcacagtcat agctcactgc aacctcagcc ttccACAttt 000080
000081 gAGACATTGT AAGTTCAGAG GCCTGAGAGT TAGCATCCAG AGGCAGCAGA CACCAGCAGC ACAGCTGTTT CTCCCGCAGG 000160
000161 ATCATTGCCA GCAGAACATC CTACACCAAT GGCTCTTTGG GCAGGATCTT GGCTGTGCTT TGTCTGTCTA GCTTCATGCC 000240
000241 TAAGTTTGCC AAGAGCCCTG ATCCAGGTGA AGTGTGTAAA CCTTGCACGT GGAATTCCCA GCAAAGAAGC TGTAGGGATC 000320
000321 GGGATAGGGC CTGGGAAGTG TCTGACTTAC AGAAACCCAC CATGTCTTGT TCTCTGCTGG AGACCTCTGC TTCTCCATCT 000400
000401 TGTGAACATC CACAGGCCCC CTGCACCGTA ATCTTGCCCT CTTACTGTTG ACTCAGTCCT CATGGAAGTT ATAAAAGAAC 000480
000481 TTGTGTGGAT TAGCTTGCTA AATACATCCA AGATTTGAAG AACTGAAAAC AAAATCAGTA TTAAACCTGC TTTTTAAAAA 000560
000561 TGTAAGTGAA GTAACTTCTG GCCATGGTTC ATTTCAGACC TCTCTAAAGC CTGCAATTAC CTCTCAGTGT ATGTGAATTT 000640
000641 TTTTCCAGGA GTAAAGTTAC TTGACTCTAG TGAGTCTA
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Predicted Small Protein

Name NONHSAT027419_smProtein_188:430
Length 81
Molecular weight 8687.5467
Aromaticity 0.0625
Instability index 45.2125
Isoelectric point 9.43817138672
Runs 12
Runs residual 0.0111842105263
Runs probability 0.0623564741211
Amino acid sequence MALWAGSWLCFVCLASCLSLPRALIQVKCVNLARGIPSKEAVGIGIGPGKCLTYRNPPCL
VLCWRPLLLHLVNIHRPPAP
Secondary structure LLLLLLLHHHHHHHHHHLLLHHHHHHHHHHHHLLLLLLLLEEELLLLLLLEELLLLLLEE
EEEEHHHHHHHHHHLLLLLL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHH
HHHHHHHHHHHHHLLLLLLL
PiMo ooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTT
TTTTTTTTTTTTTooooooo