NONHSAT027280
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT027280 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
915 nt |
Genomic location |
chr12+:22726359..22728039 |
Exon number |
3 |
Exons |
22726359..22726457,22726930..22727076,22727371..22728039 |
Genome context |
|
Sequence |
000001 CTAGAAGAAG GAAACACATT AAACATTGCT GTTAATAATT ACTTATTGAC AGTAAAAAGA GTAACAGGTG AAGATTTTTG 000080
000081 GATTCATTCT AAAAtttttT ATATATTGAG TTTGGATGTT AGATATAACC TCATAAGTGA TGTTGGCACA TATTATAGTG 000160 000161 TAAAACTACT TCAGAAATAA CTTAATCTCA TTTACTTAAA CCTTATGTTT GATGATACTG GGCCTGAAGG AGGAGAAttt 000240 000241 ttctttcAAG GTGGAGAATT GATTGGCAAA GCACTAAATG AGAACACAAC TCTGAAATAC CTAAGAATGA CTGGAAACAA 000320 000321 GATTAAAAAT AAGAGTGGAA TATTTTTTGC TGCAATGCTG CAAATTAATT CATCCTTAGA GAAAGTAGGT CTGGGTTACT 000400 000401 GTGATCTGGG AATGCAAAGT GTGATAGCAT TTGCTACGAT ACTAACTCAA AACAAAGCAA TTAAGGGAAT AAACCTAAAC 000480 000481 TGACCTATGC AGTATGGCAA ACAGAAAGAG TCCACAGCCC ACGTAGGCCA TATGTTGAAA GAAAATAACT GCCTTGTTCA 000560 000561 ACTACACATG TGTAAGCATA ATATAAAAAA CTGTAGTATA CAACAATTAT ATGTTATTCA ATGTATCTTA ACAGTAGCCT 000640 000641 ATGCTACCTT GATGTCAGCT GCAATCAAAT ATCTCAGGAT GGAATTATGT ATCTAGCTCA TGTAAAAGCA ATATTACCCT 000720 000721 AGAAGCAGTA GATTTTTCTT TTAACAGAAT AGAAAATGCA GGAGCTAAGT ATCTCCAAGA AATTCTTACT TTACACAATG 000800 000801 GGCATTTTAA AGCATTGTCA GTAGTCAGCA ACAACATAGA GAAGGACTTG CACTTTCACA ATCAATGAAA ACGAATCCCA 000880 000881 CATTTTCTAA TATCTACATT TGGAGAAACA AATTT |
Predicted Small Protein
Name | NONHSAT027280_smProtein_620:721 |
Length | 34 |
Molecular weight | 3704.317 |
Aromaticity | 0.0909090909091 |
Instability index | 54.8060606061 |
Isoelectric point | 5.19354248047 |
Runs | 7 |
Runs residual | 0.0279973649539 |
Runs probability | 0.0374870668989 |
Amino acid sequence | MYLNSSLCYLDVSCNQISQDGIMYLAHVKAILP |
Secondary structure | LLLLLLEEEEELLHHHHLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |