NONHSAT026831

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT026831

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1877 nt

Genomic location

chr12+:9769880..9811010

Exon number

5

Exons

9769880..9769947,9806279..9806404,9808469..9808575,9809164..9809245,9809517..9811010

Genome context

Sequence
000001 GCTTAACTGG TACATCTGGA CTCTGATGAG TGAGAAGTCC AAGCAAATAG AAAAGCCACA GCCAAACGAT AAAACTCTGC 000080
000081 AAAGACAATG TCTAGCACTT ATATCTCCAG TAACTCCTGT CAAGGTTTAT TGTTGCTTGT TCATCATTGC AGTCCTGACT 000160
000161 ACAAGTGTGA TTGCACTTTC TATTGTTTTG TCAGAATTTC CTGAAAAGAT ACAAAGGCCC TTCTGACCAT TGGATTGGCC 000240
000241 TTAGAAGAGA ATCATCCCAT CGCATTTGGA AATGGACAGA CAACATGGAA TATAATAACA TTTTTCACAC ATTTACAAAA 000320
000321 CAATTTGGGA GGAGGCTGGA AATCATCTTG ACTGAAGACC ACCAATGGCA GCAGTTCATT TGGGCTTGCT ATCAGAGGAA 000400
000401 GTGGAGAATG TGCCTTCCTG AATGACAATG GAGTCAACAG TGGCAGAATC TACATGAACA GAAAATGGAT TTGTAGCAAG 000480
000481 CCAAACAATT ATGTCTACAG TTGCCAGTTA Tgtccccact gggatactac ctagtagagc tgtgagaaga gggccaccat 000560
000561 cctccagact ccagaatggt ggaatcagca gcagcttcca ccatgcccct ggaaaaactg caagtaacag acctgcacat 000640
000641 gtatccccta catctaaaat aaaagttgga aaaaaTGgaa ctttgatgtt aagatgcact gatacaaaac ttaaattttg 000720
000721 gtctcctaca ttaaaacaat atgagtctct taaaatattg atttgttctt agtaagatta caagaggctt tgatttttaa 000800
000801 ttctgcaatg tttccttaac agccattctg aattacaaac taattcctat ttctgccaca ttccttcctg agaactgtct 000880
000881 agtcctggtt tGGGAtttat cttaaaggtc tagaaaggca acattttact tcagcaaaac ttgattctat attgttgttt 000960
000961 tttcttaatg tgtcaaaatt gttttgttac taggatttcc tatgttgtta ttaaatgtat tcccctgatc aaggtcactg 001040
001041 gcctagaaaa caaagattct gtgttttacc aagataattc ccagtgcttc atggtgtctt tattaggctt tgactgctta 001120
001121 gggaaactga gccttaaaag ggtaaaagtt tttccatcca tgtaactttc tgaggtcttt aggttgtcac tctgattaaa 001200
001201 tgagtagtat tcttagcagt gacttattat ctgttgaagg aagtatttta agctttttga catctttggc aggtttctct 001280
001281 agaatccaaa tcctaaatta agccttttgg cctaaaaatg actgggattt ttccaggtgg accccctaga tatgctcctc 001360
001361 caaaggcttg tctttcttgt agagttatta aatgattagg cttatttggc aaatactgct agaagcattg tcaaataaga 001440
001441 aatggtgttt tacctttctt taagctgtgt ttgtgtaagt tcatcattta tagaaatgtg aaattttatg agattcctaa 001520
001521 gatactgaca tgctgagata cctgtaataa ttgcaatttt tatgttggat gattgtatgc cacagaagca cttaaatttc 001600
001601 ctggttaatt ggtaacgtta atcagatctt tacctatggc tgttctgggt ttttgtcatt cacagttatt attttaattt 001680
001681 cttctttgga agcgttcgca atcagctata gtccaaaatt gctaattaag atcaagcaaa acaaaattaa ttacgtaaaa 001760
001761 ttaatttata aggatgtttt tatgacgtaa atgttttatt ttccagagcc aaggaaattt tctgtcacaa gctatctacc 001840
001841 gtttgcaata atttgataaa taatcctttg tgaacaa
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Predicted Small Protein

Name NONHSAT026831_smProtein_284:424
Length 47
Molecular weight 5936.7843
Aromaticity 0.195652173913
Instability index 74.0630434783
Isoelectric point 7.83843994141
Runs 7
Runs residual 0.00918737060041
Runs probability 0.0378277437101
Amino acid sequence MEYNNIFHTFTKQFGRRLEIILTEDHQWQQFIWACYQRKWRMCLPE
Secondary structure LLLLLHHHHHHHHLLLEEEEEELLLHHHHHHHHHHHHHHHHHLLLL
PRMN -
PiMo -