NONHSAT024939
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024939 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
588 nt |
Genomic location |
chr11+:125034622..125267879 |
Exon number |
6 |
Exons |
125034622..125034672,125104941..125105011,125201715..125201821,125221180..125221288,125237742..125237881,125267770..125267879 |
Genome context |
|
Sequence |
000001 GTATAGGCTG TGTTGTCACG CCGGTGTCAG TCTGATGAAG ATTGGCATCA GGTGAAGTCT GGAGCAGGAC TTCTGAGGCT 000080
000081 TTCTATCCTC CATGCTGCTC ACTAGAAAAG GGGCTGTGAA CTGTGCTTTG GCTCTAGCAG ACAGGAAGAA ATTCTGGCCC 000160 000161 AGCTGGAAGT AGAAAGAGGG GAGTGAGTCT CCTGAGGACC ATCTCAGAGG CCCCGGGATC ACCCGAACAG TCCTCCATGT 000240 000241 GAATCAATCC CATGATGCAA CATGCCTCCC CAGCCCCCGC TCTGACGATG ATGGCCACGC AGAATGTCCC GCCCCCACCC 000320 000321 TACCAGGACA GCCCACAGAT GACGGCAACC GCCCAGCCAC CCTCCAAGGC CCAGGCTGTC CACATCTCTG CCCCCTCAGC 000400 000401 TGCTGCCAGC ACACCTGTGC CCAGTGCCCC CATCGACCCC CAGGCCCAGC TGGAGGCTGA CAAGCGAGCT GTATACAGAT 000480 000481 GGTGAAGGCA ATCCAGGTCC TGAGAATCCA CCTGCTGGAG CTGGAGAAAG TCAATGAACT CTGCAAGGAC TTTTGTAACC 000560 000561 GTTACATCAC CTGCCTCAAA ACCAAGAT |
Predicted Small Protein
Name | NONHSAT024939_smProtein_251:484 |
Length | 78 |
Molecular weight | 8104.1328 |
Aromaticity | 0.038961038961 |
Instability index | 81.8298701299 |
Isoelectric point | 6.69757080078 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0368309485956 |
Amino acid sequence | MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAP IDPQAQLEADKRAVYRW |
Secondary structure | LLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLEELLLLLLLLEEEELLLLLLLLLLLLLLL LLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |