NONHSAT024533

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT024533

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2390 nt

Genomic location

chr11-:118866295..118868684

Exon number

1

Exons

118866295..118868684

Genome context

Sequence
000001 GCGCCGTCCT GCAGATGTGC GGGGACGCGC GCCCGCCGCA ACGTGAGGCT CATAGGCCAC ACGCAACTCT GAGCATTGGC 000080
000081 CAGGACCTGT AGTAGCCAAC AGGacactta ataactgatg tataggtgcg cactgtgtgt ccagagcttt acgttaacca 000160
000161 cctcactgtg tcatctcgct gaggttgtgt ggtttactat tactgctatt agcgcatttt taagcgggaa acctgaggca 000240
000241 tgaggaggta aggagctttg aggagggttg cacgggtgtt aagtagcgcg gtcagcacct gatccccgtc actcATCAGT 000320
000321 ACGGCGGTTG GAGGGGAATG CCTGCTGGAG GGGACCACGA ACTAAACTCA ATCGCCCCCA CAGGGTGTGC TCGCCGTGGT 000400
000401 TCCTATAAAG CTGTAAGGGA GGCTACACAG CGTGCAGCGT TGTTGCTGAG GGATCGCACA CTTCCCGTAG ATTTTGTTGC 000480
000481 TAGTTCTGGT GCACTAACGT GGATGGACTG CTTGCTGTCT GTAGGGCCTG CCCACGGTCA GCGCTACAGA ATTCAGGCCC 000560
000561 GGCGTAGCTA CTTCCAACCC TTCAGATCTT CACTTCCTGT TGGAACTGTC CTCTAGACTG TAGCCTCTGC CAGAAATAAT 000640
000641 TCATTTTGAA TACCCTTGTA ACACCCAATT CCTTGATCTC CTATCATTCC CCTGGCAGGG TCAGTCCTCG ACCTTGTCCC 000720
000721 CCCAAATTGC TTCGTCTCTG AATCCAGACT CTGAAGTTCG GCTCTGCCTA CCACCTTAAG TTATCCGATG TGGCCTTACC 000800
000801 GTCAGCCTAG TCTTTGACTA CAGGAAGACC TCTCTTCCTG AAGAAGACGC CTCTTTTCAT CCATTCACTC TGGAAATGAT 000880
000881 TCAACGTCTG CCTGCTGCTG ATGCTTTACT CTCCACcagg ggttttcgaa gtgtgcttcc ccattccccc tgggcctata 000960
000961 gcatcagcat cagggaactt gtcagtaacg cacattcttg ggccccaacc cagaactact gaatcagaaa cttggggtga 001040
001041 gggcctgtcg tggtggctca tgcctgtaat cccaacactt tgggaagcag aggagggtgg atcacctgag gtcaggagtt 001120
001121 gaggaccagc ctggctaaca tggtgaaacc ccgtctctac taaaaataga aaaattagcc agatgtggtg gcgtgtgccc 001200
001201 ataatcctag ctactcggga gactgaggca ggagactcgc ttgaacccaa gaggcggagg ttgcagtgag ccaagattgc 001280
001281 accactgcac tctagcctgg gcgacagagt gagactccgt ctcaaaaaaa aaaaaagaac tcagggtgag gcccagccgg 001360
001361 ctgtggtttt atgagctttt caggggatac tgatgcggga tcaaatttga gaagcactgG TCTAGGTCTT AGATCCTCTT 001440
001441 GCTTCAGTTT CGTCATTGGA TCTCAGGAAT GTTCAGCTGC CCTCTCAAGG CAACTTCTTA CTTCACTTGA CCTTCCAAGA 001520
001521 CCTCTCGTTC TGTCAAACCC CAATTTTGGA TCAACCCAGG CATGCTTCCC TCATGTGTTC CAAAGCTGGT CAGAGTAGTC 001600
001601 TACACCACTA TCTGCTTCAA CTTCTAGTAA CGTCTAAGCC TTCAGCAGTT TTGCTTATGA AACTGCTTCA CTGAAGTTCT 001680
001681 CCACCACCAA GTAGTCAGCT GGCATCGGAA TTCGGCTTGT GTCAAATGGA ACTCAACATC TTCCTCTTCA GGACATCCCC 001760
001761 TATTTTCATC CTCCCAGTGA ATGACACCAC CAAGTTAAAG CCTGGAggct gggtgtagtg gttcatgcct gtaatcccag 001840
001841 tagtttagga aaccgaggtg ggcagatggc ttgcgcccag gtgtttgaga gcagcctggc caacatggcg aaaccctgtc 001920
001921 tctacaaaaa agtactgcca ggcgcggtgg cttacgcctg taatcccagc actttgggag gctaagcagg cagatcacct 002000
002001 caggtcagga gttcaagacc aggctgggcc aacatggcaa aaccccatct ctactaaaaa tacaaaaatt agcctggtgt 002080
002081 ggtggcatgt gtctagtccc agctactcga gaggctgagg caggggaact gcttgaaccc aggaggcggg ggttgcactg 002160
002161 aacctgttgc gccactgcat tccagcctgg gtggcagagc aagactctta tctcaaaaac aaccaaacac aaaacaaaaa 002240
002241 ttagctgggt ctggtgacat gtgcttatag tcccagctac ttggggggct gaggcaggag gattgcttga gcctgggagg 002320
002321 ttgaggctgc agcaatgagc tgtgtttgtg ccactgcact ctagcctgga caacaaaatg agaccttgtc
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Predicted Small Protein

Name NONHSAT024533_smProtein_1370:1597
Length 76
Molecular weight 8015.8715
Aromaticity 0.0933333333333
Instability index 70.0786666667
Isoelectric point 5.60357666016
Runs 9
Runs residual 0.0289361702128
Runs probability 0.0316394826198
Amino acid sequence MSFSGDTDAGSNLRSTGLGLRSSCFSFVIGSQECSAALSRQLLTSLDLPRPLVLSNPNFG
STQACFPHVFQSWSE
Secondary structure LLLLLLLLLLLLLLLLLLLLEEEEEEEEELLHHHHHHHHHHHHHHLLLLLLEEELLLLLL
LLLLLLLLLEEELLL
PRMN -
PiMo -