NONHSAT024467
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024467 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1391 nt |
Genomic location |
chr11+:118272104..118280562 |
Exon number |
4 |
Exons |
118272104..118272432,118276372..118276424,118277652..118277812,118279715..118280562 |
Genome context |
|
Sequence |
000001 CGAGTGGCTG CCCCACAAAA TGCCTGCTTC TCTGCGGAAT CCTACTGTTC TTCACATGCT CTCTAATACC ATCTTTTCAT 000080
000081 ATCCACTTTC TCTTCCATGT TGAAAAATTA AATTGACAGG CTGGATTCTG CAAAGATCTT TGGACATTTA AGTATCTTCG 000160 000161 ACCGGCGCGA AAAGAGGCGG CCTGACCTTG GAAGTGGGAC GGGGTCCTGC AGCGGGTCCT TCCGGCGGGT GACATTCAGC 000240 000241 CGGCGGTTCG GGGCGACGGA CTCTCCATTC CAGAACCATG GCCCAATTTG TCCGTAACCT TGTGGAGAAG ACCCCGGCGC 000320 000321 TGGTGAACGG CATTGGCAGT TCTGTTTGGA ACTATCTCTT AGAGCTTTGT GTCTGCTTAA AGCTGCTGTG ACTTACTCGA 000400 000401 AGCCTCGATT GGCCACATTT TGGTACTACG CCAAGGTTGA GCTGGTTCCT CCCACCCCTG CTGAGATCCC TAGAGCTATT 000480 000481 CAGAGCCTGA AAAAAATAGT CAATAGTGCT CAGACTGGTA GCTTCAAACA GCTCACAGTT AAGGAAGCTG TGCTGAATGG 000560 000561 TTTGGTGGCC ACTGAGGTGT TGATGTGGTT TTATGTCGGA GAGATTATAG GCAAGCGGGG CATCATTGGC TATGATGTTT 000640 000641 GAAGACCAAT CTTTAACATC TGATTATATT TGATTTATTA TTTGAGTGTT GTTGGACCAT GTGTGATCAG ACTGCTATCT 000720 000721 GAATAAAATA AGATTTGTCA AAACTCAGTG TTTTCTCCAT CAGATACTCC ATGAAAGGTC ACAATTTCTC TTGATATTAA 000800 000801 GCTGGGTTGT CTTTAAACAA CCCTAAATAC ACGTCTGTTT AGCCCGCAAT TGGAAAGGAT ATATGTGGCA ATATTAACCT 000880 000881 GGTACATGAA TATATGGGGA TAACATTTTA ATTTGAAGGT TTGGAATATA TATATTTAAG CTTTATTTCC AGAACAGTGA 000960 000961 GGGTTAGGTC TTGGGAAAAC TATAACTTGC CAAAGTAGAA GAAATAGTAG TACCATATGC CAAAGTGATA GAGATGAATC 001040 001041 ATGTCAGTAG TTAGAATAAC ATTTCAACTG TTTTCTTTGC TAAAATCACA GAAAGACCCT ATTGACAACA TCTATGTCTG 001120 001121 TAAAAATGTT AGAGTACTTG TCATCTTGAA TATAGCCTCC CCAAGAGAGA ACAGGGTGGT ATTCTAAGTA TGTTTCTTTG 001200 001201 TAACATCTTT AGCAGTAGGA CAGAGCCATA CATGTGAAAT CTGATTTTTA TGTGTGTTAT TCGTTTGTCT GGTTTTACTA 001280 001281 CCTTTGCAAA AACAAAATAC CCCAAAGATA TTTAAACAAG GTTATAATTT AGCATCTTCC CTGGATCTAA ATAGTATATT 001360 001361 ATATCCTGAA ATAAATGAAA TGATTGCTAT A |
Predicted Small Protein
Name | NONHSAT024467_smProtein_1040:1186 |
Length | 49 |
Molecular weight | 5577.6115 |
Aromaticity | 0.0833333333333 |
Instability index | 53.6645833333 |
Isoelectric point | 10.0202026367 |
Runs | 10 |
Runs residual | 0.0427631578947 |
Runs probability | 0.0487104751811 |
Amino acid sequence | MSVVRITFQLFSLLKSQKDPIDNIYVCKNVRVLVILNIASPRENRVVF |
Secondary structure | LLEEEEHHHHHHHHHHLLLLLLLEEEEELLEEEEEEEELLLLLLEEEL |
PRMN | - |
PiMo | - |