NONHSAT024010
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT024010 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
729 nt |
Genomic location |
chr11+:107992532..108002681 |
Exon number |
3 |
Exons |
107992532..107992653,107999370..107999928,108002634..108002681 |
Genome context |
|
Sequence |
000001 ACGCGACGGG TTCTGGTCCA AAAACCGCCT AAGTGCTCCG ATAACACCCA GGGACTCGCC TATTTTTACA GCGCGTTTCT 000080
000081 ACTTCCAAGG TCTCGGCGTA ATCATCTTAA TGAGCGTTAC TGgtgggggg aatcagatcc tgtttgtatg cttatggaat 000160 000161 tatccagaag taaaaggggt gaatgatgta gaggagaagg aagggataac tgtgccatct ttgaaaaggc aactggaaat 000240 000241 gggatccaga gtaaagtgga gagAACCAGG GAAGATTCCA TTAAACTGGA CCAGAAGCTT GAAAGAAGAG AAGTGGCTTA 000320 000321 GTAAACAAGG AACAAACTAG CTAAGTAGAA AGGGGACTTT TAAAATTTAA tttttatttc aataggcttt tgggaacagg 000400 000401 tggtgttgga ttatatgaat aagttcttta ttggtggtat ctgatatttt ggtgcaccca tcacctgagc agtatacact 000480 000481 gtaaaccaat gtgtagtctt ttattcctca cccccacccc ccgcctttcc cctgagtccc caaagtccac tgtatcattc 000560 000561 ttatgccttt gtgtcctcat agcgcagctc ccacttatga gtgagaacat aagctgtttg gtgtttccat tcctgagtta 000640 000641 cttcacttag aataatagtc tccaattcca tccaggttgc aGAAATAAGA TATGTGGAAC GGAGTTATGT ATCAAAACCC 000720 000721 ACTTTGAAG |
Predicted Small Protein
Name | NONHSAT024010_smProtein_488:649 |
Length | 54 |
Molecular weight | 5900.0838 |
Aromaticity | 0.11320754717 |
Instability index | 74.9962264151 |
Isoelectric point | 5.88800048828 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0410312273058 |
Amino acid sequence | MCSLLFLTPTPRLSPESPKSTVSFLCLCVLIAQLPLMSENISCLVFPFLSYFT |
Secondary structure | LEEEEELLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLEEELLLLLEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooooo |