NONHSAT023191

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT023191

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1982 nt

Genomic location

chr11+:76498677..76500442

Exon number

1

Exons

76498677..76500442

Genome context

Sequence
000001 TTCTAGATGC TTGGTGCATC TTCACGTGGT GTCTGCTCTG TACCAGGCTC AGTGCTCAGC TTCAAGGGCA TAAAAAGGAA 000080
000081 CCTAATCGCA TCCCTGCCCA CAGTAGGGTA GACAGTTAAA CATGTAAGTA CAGTTCAGCA TGACCAGGTC TAAGCACATG 000160
000161 TGCTCATTTG TAAGCTGAGG CAGAGTGGAT TTGGAGCTAA GACATCTGGG GTTAAGTCCG GGGTCCTCTC CTTCCCAGCT 000240
000241 GAGTAACATC CATTTCTGTG TCTGCAAAAT AGGGACAGTA TCCCCAGGGT CAAGGCTCTG GTGAGGCAGA AGTGAGATGC 000320
000321 TGGTGGAGAG CACATGGTGG GCTGCTGTGT TTGTCCAGAT GTGCTGCATT GGTGGGTCTG TTGCAAGAGC TGGCCCTCAG 000400
000401 GGCTCCGGGA GTCTGGCCTT GAAATTCTTT CTGCCTTGCG TTTCCAGAGC TGACAAAGTG GTTGGAGGGC AGGACGTTTC 000480
000481 TGAACCATCC ACCTGGGGAT TTCCTCGGCA TCAGCTTGAG TGAACTCATG ACTGAGGGGA GCAGGGTGGG AGGCAGCTCT 000560
000561 GTGTTGAGGA ACAGCTGATC GAGACAAAGG CCGGTCTCGG GGGTGCTGGG GCCCTGTACC AGTGGGGCCC TGTGCCAACA 000640
000641 GTGCCCTGTG GAAGTTGTCG AGGGCGGTGG GGGGAGCTGG AAAACTTTAC AGACCAGAGA TGCTGTAGTG CAGCACCAGG 000720
000721 GTCAGGCAGC TGGGGCCAGG TAGGTTCAAG CTGGAACCCA ACACCCAGAG AGCTGTCCTT ATCAGCAGAC ACCAGGGAAG 000800
000801 TGACTGAAGA ATGTCATCAC AGCCAGTCTC GGACCTGCTG TGCTCCTGGC GCCACACTGG GAACTTGGGT GGGGAGGAAC 000880
000881 ATGAAGGATC ACATGGTGAC TGCCTTCAGA AGGCTTAGCA AATCACCGTC ATTGTCTACC ACACATTGAG TATTTGTGTA 000960
000961 GCAGATAGTG AGTGGAATGC CTGCCATTCT GTCATTTAAT CCTTTCAACA AACCTGTGTT CTTAGCCCTG TTGAGGACCC 001040
001041 TCGGAGCGGG TCCCAAGACT TACCCAAGGC TGGTAGGTAC AGAGCTAGGT TCACACCTGG TCTGGGTCTT GCGGTTGACC 001120
001121 CGTTCATCCT GCTCTTCCTC CACACACCCT CTAGGCCTGG CTCTGATCCC AGGTGGGGGA AAGAACACAC AGGTAAAGTA 001200
001201 GGCAGGGCAC CGCCCCAAGC TGCTTACACA TCAAGTAGGA AAACAGCAGG TAACTCACGG CAGAGAATTT ACTGAAGGAG 001280
001281 GCCTGTGGGT AGCCTGTGGG GTGAGAGGCC AGGAGGGAGG GGTGGCCCGA GGGCCTGAGT GGACAGAACA GGCTTTGTTT 001360
001361 TGCTGGGAGC AGGCCAGGGG CAGGCGGGAT GGATGCATGC AGTTCTGGCA GTCACATGAG GCATCAGGTC CCAGGTCCTG 001440
001441 GGCCCTGCTC TGCCATTCCT TGCTGTCACT GCCCCTCTCT GGGCCCCAGT TGCCCATGAT CCCCAAGGGG CCTTCCAGCT 001520
001521 CCCAAGCCCT GGAATTCTCC AAGTTTGGAG ATGTATTAGC AGAGGCTGAG AGTTGTTCAA AGTCCATCAA GGGAAGGCTG 001600
001601 TTCCCACTTT GGCTGTCAAG GAGGGTTCAA ATCCAGATGA GGGGCTGGGG ACAGGTGGGA GGGGAGAAGA AGGTGGTGAC 001680
001681 AACTTACAGG TGCCTCGTGC ATGGGAGAAC TTGATTTCTG TAGGTAAAAA GCAGAACCCA AGAGGTTTCT GATAAGGAGA 001760
001761 GTGATGATGG AGCATATAGA TCTGGCTCAA ATTCAGCCTC CATCACTTAC CAGTCAGGAA CCCTGGCGAT ATCACTTTAA 001840
001841 CTTTCTGAAC CTCAGAGTCT TCACCTATAA GACGGGGAAA ATAATACCAC CCTTTCAAGA TTGTTGAGAT AAATAAGTGA 001920
001921 TATAAAACAT GTAAAGCTTA GTTCTGGCCA CAGTGTAGCT ACTCAATAAA TGATAATACT AC
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Predicted Small Protein

Name NONHSAT023191_smProtein_1763:1906
Length 48
Molecular weight 5652.4844
Aromaticity 0.148936170213
Instability index 46.870212766
Isoelectric point 6.69622802734
Runs 7
Runs residual 0.0173404255319
Runs probability 0.0493729023141
Amino acid sequence MMEHIDLAQIQPPSLTSQEPWRYHFNFLNLRVFTYKTGKIIPPFQDC
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHHHHHLLLEEEEELLLEEELLLLLL
PRMN -
PiMo -