NONHSAT022137
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT022137 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
7176 nt |
Genomic location |
chr11+:65266430..65273938 |
Exon number |
2 |
Exons |
65266430..65271270,65271604..65273938 |
Genome context |
|
Sequence |
000001 CCTCACAAAG GCGGCGGAAG GTGATCGAAT TCCGGTGATG CGAGTTGTTC TCCGTCTATA AATACGCCTC GCCCGAGCTG 000080
000081 TGCGGTAGGC ATTGAGGCAG CCAGCGCAGG GGCTTCTGCT GAGGGGGCAG GCGGAGCTTG AGGAAACCGC AGATAAGTTT 000160 000161 TTTTCTCTTT GAAAGATAGA GATTAATACA ACTACTTAAA AAATATAGTC AATAGGTTAC TAAGATATTG CTTAGCGTTA 000240 000241 AGTTTTTAAC GTAATTTTAA TAGCTTAAGA TTTTAAGAGA AAATATGAAG ACTTAGAAGA GTAGCATGAG GAAGGAAAAG 000320 000321 ATAAAAGGTT TCTAAAACAT GACGGAGGTT GAGATGAAGC TTCTTCATGG AGTAAAAAAT GTATTTAAAA GAAAATTGAG 000400 000401 AGAAAGGACT ACAGAGCCCC GAATTAATAC CAATAGAAGG GCAATGCTTT TAGATTAAAA TGAAGGTGAC TTAAACAGCT 000480 000481 TAAAGTTTAG TTTAAAAGTT GTAGGTGATT AAAATAATTT GAAGGCGATC TTTTAAAAAG AGATTAAACC GAAGGTGATT 000560 000561 AAAAGACCTT GAAATCCATG ACGCAGGGAG AATTGCGTCA TTTAAAGCCT AGTTAACGCA TTTACTAaac gcagacgaaa 000640 000641 atggaaagat taattgggag tggtaggatg aaacaatttg gagaagatag aagtttgaag tggaaaactg gaagacagaa 000720 000721 gtacgggaag gcgaagaaaa gaatagagaa gatagggaaa ttagaagata aaaacatact tttagaagaa aaaagataaa 000800 000801 tttaaacctg aaaagtagga agcagaagaa aaaagacaag ctaggaaaca aaaagctaag ggcaaaatgt acaaacttag 000880 000881 aagaaaattg gaagatagaa acaagataga aaatgaaaat attgtcaaga gtttcagata gaaaatgaaa aacaagctaa 000960 000961 gacaagtatt ggagaagtat agaagataga aaaatataaa gccaaaaatt ggataaaata gcactgaaaa aatgaggaaa 001040 001041 ttattggtaa ccaatttaTT TTAAAAGCCC ATCAATTTAA TTTCTGGTGG TGCAGAAGTT AGAAGGTAAA GCTTGAGAAG 001120 001121 ATGAGGGTGT TTACGTAGAC CAGAACCAAT TTAGAAGAAT ACTTGAAGCT AGAAGGGGAA GTTGGTTAAA AATCACATCA 001200 001201 AAAAGCTACT AAAAGGACTG GTGTAATTTA AAAAAAACTA AGGCAGAAGG CTTTTGGAAG AGTTAGAAGA ATTTGGAAGG 001280 001281 CCTTAAATAT AGTAGCTTAG TTTGAAAAAT GTGAAGGACT TTCGTAACGG AAGTAATTCA AGATCAAGAG TAATTACCAA 001360 001361 CTTAATGTTT TTGCATTGGA CTTTGAGTTA AGATTATTTT TTAAATCCTG AGGACTAGCA TTAATTGACA GCTGACCCAG 001440 001441 GTGCTACACA GAAGTGGATT CAGTGAATCT AGGAAGACAG CAGCAGACAG GATTCCAGGA ACCAGTGTTT GATGAAGCTA 001520 001521 GGACTGAGGA GCAAGCGAGC AAGCAGCAGT TCGTGGTGAA GATAGGAAAA GAGTCCAGGA GCCAGTGCGA TTTGGTGAAG 001600 001601 GAAGCTAGGA AGAAGGAAGG AGCGCTAACG ATTTGGTGGT GAAGCTAGGA AAAAGGATTC CAGGAAGGAG CGAGTGCAAT 001680 001681 TTGGTGATGA AGGTAGCAGG CGGCTTGGCT TGGCAACCAC ACGGAGGAGG CGAGCAGGCG TTGTGCGTAG AGGATCCTAG 001760 001761 ACCAGCATGC CAGTGTGCCA AGGCCACAGG GAAAGCGAGT GGTTGGTAAA AATCCGTGAG GTCGGCAATA TGTTGTTTTT 001840 001841 CTGGAACTTA CTTATGGTAA CCTTTTATTT ATTTTCTAAT ATAATGGGGG AGTTTCGTAC TGAGGTGTAA AGGGATTTAT 001920 001921 ATGGGGACGT AGGCCGATTT CCGGGTGTTG TAGGTTTCTC TTTTTCAGGC TTATACTCAT GAATCTTGTC TGAAGCTTTT 002000 002001 GAGGGCAGAC TGCCAAGTCC TGGAGAAATA GTAGATGGCA AGTTTGTGGG TTTTTTTTTT TTACACGAAT TTGAGGAAAA 002080 002081 CCAAATGAAT TTGATAGCCA AATTGAGACA ATTTCAGCAA ATCTGTAAGC AGTTTGTATG TTTAGTTGGG GTAATGAAGT 002160 002161 ATTTCAGTTT TGTGAATAGA TGACCTGTTT TTACTTCCTC ACCCTGAATT CGTTTTGTAA ATGTAGAGTT TGGATGTGTA 002240 002241 ACTGAGGCGG GGGGGAGTTT TCAGTATTTT TTTTTGTGGG GGTGGGGGCA AAATATGTTT TCAGTTCTTT TTCCCTTAGG 002320 002321 TCTGTCTAGA ATCCTAAAGG CAAATGACTC AAGGTGTAAC AGAAAACAAG AAAATCCAAT ATCAGGATAA TCAGACCACC 002400 002401 ACAGGTTTAC AGTTTATAGA AACTAGAGCA GTTCTCACGT TGAGGTCTGT GGAAGAGATG TCCATTGGAG AAATGGCTGG 002480 002481 TAGTTACTCT TTTTTCCCCC CACCCCCTTA ATCAGACTTT AAAAGTGCTT AACCCCTTAA ACTTGTTATT TTTTACTTGA 002560 002561 AGCATTTTGG GATGGTCTTA ACAGGGAAGA GAGAGGGTGG GGGAGAAAAT GTTTTTTTCT AAGATTTTCC ACAGATGCTA 002640 002641 TAGTACTATT GACAAACTGG GTTAGAGAAG GAGTGTACCG CTGTGCTGTT GGCACGAACA CCTTCAGGGA CTGGAGCTGC 002720 002721 TTTTATCCTT GGAAGAGTAT TCCCAGTTGA AGCTGAAAAG TACAGCACAG TGCAGCTTTG GTTCATATTC AGTCATCTCA 002800 002801 GGAGAACTTC AGAAGAGCTT GAGTAGGCCA AATGTTGAAG TTAAGTTTTC CAATAATGTG ACTTCTTAAA AGTTTTATTA 002880 002881 AAGGGGAGGG GCAAATATTG GCAATTAGTT GGCAGTGGCC TGTTACGGTT GGGATTGGTG GGGTGGGTTT AGGTAATTGT 002960 002961 TTAGTTTATG ATTGCAGATA AACTCATGCC AGAGAACTTA AAGTCTTAGA ATGGAAAAAG TAAAGAAATA TCAACTTCCA 003040 003041 AGTTGGCAAG TAACTCCCAA TGATTTAGTT TTTTTCCCCC CAGTTTGAAT TGGGAAGCTG GGGGAAGTTA AATATGAGCC 003120 003121 ACTGGGTGTA CCAGTGCATT AATTTGGGCA AGGAAAGTGT CATAATTTGA TACTGTATCT GTTTTCCTTC AAAGTATAGA 003200 003201 GCTTTTGGGG AAGGAAAGTA TTGAACTGGG GGTTGGTCTG GCCTACTGGG CTGACATTAA CTACAATTAT GGGAAATGCA 003280 003281 AAAGTTGTTT GGATATGGTA GTGTGTGGTT CTCTTTTGGA ATTTTTTTCA GGTGATTTAA TAATAATTTA AAACTACTAT 003360 003361 AGAAACTGCA GAGCAAAGGA AGTGGCTTAA TGATCCTGAA GGGATTTCTT CTGATGGTAG CTTTTGTATT ATCAAGTAAG 003440 003441 ATTCTATTTT CAGTTGTGTG TAAGCAAGTT TTTTTTTAGT GTAGGAGAAA TACTTTTCCA TTGTTTAACT GCAAAACAAG 003520 003521 ATGTTAAGGT ATGCTTCAAA AATTTTGTAA ATTGTTTATT TTAAACTTAT CTGTTTGTAA ATTGTAACTG ATTAAGAATT 003600 003601 GTGATAGTTC AGCTTGAATG TCTCTTAGAG GGTGGGCTTT TGTTGATGAG GGAGGGGAAA CTTTTTTTTT TTCTATAGAC 003680 003681 TTTTTTCAGA TAACATCTTC TGAGTCATAA CCAGCCTGGC AGTATGATGG CCTAGATGCA GAGAAAACAG CTCCTTGGTG 003760 003761 AATTGATAAG TAAAGGCAGA AAAGATTATA TGTCATACCT CCATTGGGGA ATAAGCATAA CCCTGAGATT CTTACTACTG 003840 003841 ATGAGAACAT TATCTGCATA TGCCAAAAAA TTTTAAGCAA ATGAAAGCTA CCAATTTAAA GTTACGGAAT CTACCATTTT 003920 003921 AAAGTTAATT GCTTGTCAAG CTATAACCAC AAAAATAATG AATTGATGAG AAATACAATG AAGAGGCAAT GTCCATCTCA 004000 004001 AAATACTGCT TTTACAAAAG CAGAATAAAA GCGAAAAGAA ATGAAAATGT TACACTACAT TAATCCTGGA ATAAAAGAAG 004080 004081 CCGAAATAAA TGAGAGATGA GTTGGGATCA AGTGGATTGA GGAGGCTGTG CTGTGTGCCA ATGTTTCGTT TGCCTCAGAC 004160 004161 AGGTATCTCT TCGTTATCAG AAGAGTTGCT TCATTTCATC TGGGAGCAGA AAACAGCAGG CAGCTGTTAA CAGATAAGTT 004240 004241 TAACTTGCAT CTGCAGTATT GCATGTTAGG GATAAGTGCT TATTTTTAAG AGCTGTGGAG TTCTTAAATA TCAACCATGG 004320 004321 CACTTTCTCC TGACCCCTTC CCTAGGGGAT TTCAGGATTG AGAAATTTTT CCATCGAGCC TTTTTAAAAT TGTAGGACTT 004400 004401 GTTCCTGTGG GCTTCAGTGA TGGGATAGTA CACTTCACTC AGAGGCATTT GCATCTTTAA ATAATTTCTT AAAAGCCTCT 004480 004481 AAAGTGATCA GTGCCTTGAT GCCAACTAAG GAAATTTGTT TAGCATTGAA TCTCTGAAGG CTCTATGAAA GGAATAGCAT 004560 004561 GATGTGCTGT TAGAATCAGA TGTTACTGCT AAAATTTACA TGTTGTGATG TAAATTGTGT AGAAAACCAT TAAATCATTC 004640 004641 AAAATAATAA ACTATTTTTA TTAGAGAATG TATACTTTTA GAAAGCTGTC TCCTTATTTA AATAAAATAG TGTTTGTCTG 004720 004721 TAGTTCAGTG TTGGGGCAAT CTTGGGGGGG ATTCTTCTCT AATCTTTCAG AAACTTTGTC TGCGAACACT CTTTAATGGA 004800 004801 CCAGATCAGG ATTTGAGCGG AAGAACGAAT GTAACTTTAA GAGGCATTTC ATCCTTCATG AAGCCATTCA GGATTTTGAA 004880 004881 TTGCATATGA GTGCTTGGCT CTTCCTTCTG TTCTAGTGAG TGTATGAGAC CTTGCAGTGA GTTTATCAGC ATACTCAAAA 004960 004961 TTTTTTTCCT GGAATTTGGA GGGATGGGAG GAGGGGGTGG GGCTTACTTG TTGTAGCTTT TTTTTTTTTT ACAGACTTCA 005040 005041 CAGAGAATGC AGTTGTCTTG ACTTCAGGTC TGTCTGTTCT GTTGGCAAGT AAATGCAGTA CTGTTCTGAT CCCGCTGCTA 005120 005121 TTAGAATGCA TTGTGAAACG ACTGGAGTAT GATTAAAAGT TGTGTTCCCC AATGCTTGGA GTAGTGATTG TTGAAGGAAA 005200 005201 AAATCCAGCT GAGTGATAAA GGCTGAGTGT TGAGGAAATT TCTGCAGTTT TAAGCAGTCG TATTTGTGAT TGAAGCTGAG 005280 005281 TACATTTTGC TGGTGTATTT TTAGGTAAAA TGCTTTTTGT TCATTTCTGG TGGTGGGAGG GGACTGAAGC CTTTAGTCTT 005360 005361 TTCCAGATGC AACCTTAAAA TCAGTGACAA GAAACATTCC AAACAAGCAA CAGTCTTCAA GAAATTAAAC TGGCAAGTGG 005440 005441 AAATGTTTAA ACAGTTCAGT GATCTTTAGT GCATTGTTTA TGTGTGGGTT TCTCTCTCCC CTCCCTTGGT CTTAATTCTT 005520 005521 ACATGCAGGA ACACTCAGCA GACACACGTA TGCGAAGGGC CAGAGAAGCC AGACCCAGTA AGAAAAAATA GCCTATTTAC 005600 005601 TTTAAATAAA CCAAACATTC CATTTTAAAT GTGGGGATTG GGAACCACTA GTTCTTTCAG ATGGTATTCT TCAGACTATA 005680 005681 GAAGGAGCTT CCAGTTGAAT TCACCAGTGG ACAAAATGAG GAAAACAGGT GAACAAGCTT TTTCTGTATT TACATACAAA 005760 005761 GTCAGATCAG TTATGGGACA ATAGTATTGA ATAGATTTCA GCTTTATGCT GGAGTAACTG GCATGTGAGC AAACTGTGTT 005840 005841 GGCGTGGGGG TGGAGGGGTG AGGTGGGCGC TAAGCCTTTT TTTAAGATTT TTCAGGTACC CCTCACTAAA GGCACCGAAG 005920 005921 GCTTAAAGTA GGACAACCAT GGAGCCTTCC TGTGGCAGGA GAGACAACAA AGCGCTATTA TCCTAAGGTC AAGAGAAGTG 006000 006001 TCAGCCTCAC CTGATTTTTA TTAGTAATGA GGACTTGCCT CAACTCCCTC TTTCTGGAGT GAAGCATCCG AAGGAATGCT 006080 006081 TGAAGTACCC CTGGGCTTCT CTTAACATTT AAGCAAGCTG TTTTTATAGC AGCTCTTAAT AATAAAGCCC AAATCTCAAG 006160 006161 CGGTGCTTGA AGGGGAGGGA AAGGGGGAAA GCGGGCAACC ACTTTTCCCT AGCTTTTCCA GAAGCCTGTT AAAAGCAAGG 006240 006241 TCTCCCCACA AGCAACTTCT CTGCCACATC GCCACCCCGT GCCTTTTGAT CTAGCACAGA CCCTTCACCC CTCACCTCGA 006320 006321 TGCAGCCAGT AGCTTGGATC CTTGTGGGCA TGATCCATAA TCGGTTTCAA GGTAACGATG GTGTCGAGGT CTTTGGTGGG 006400 006401 TTGAACTATG TTAGAAAAGG CCATTAATTT GCCTGCAAAT TGTTAACAGA AGGGTATTAA AACCACAGCT AAGTAGCTCT 006480 006481 ATTATAATAC TTATCCAGTG ACTAAAACCA ACTTAAACCA GTAAGTGGAG AAATAACATG TTCAAGAACT GTAATGCTGG 006560 006561 GTGGGAACAT GTAACTTGTA GACTGGAGAA GATAGGCATT TGAGTGGCTG AGAGGGCTTT TGGGTGGGAA TGCAAAAATT 006640 006641 CTCTGCTAAG ACTTTTTCAG GTGAACATAA CAGACTTGGC CAAGCTAGCA TCTTAGCGGA AGCTGATCTC CAATGCTCTT 006720 006721 CAGTAGGGTC ATGAAGGTTT TTCTTTTCCT GAGAAAACAA CACGTATTGT TTTCTCAGGT TTTGCTTTTT GGCCTTTTTC 006800 006801 TAGCTTAAAA AAAAAAAAAG CAAAAGATGC TGGTGGTTGG CACTCCTGGT TTCCAGGACG GGGTTCAAAT CCCTGCGGCG 006880 006881 TCTTTGCTTT GACTACTAAT CTGTCTTCAG GACTCTTTCT GTATTTCTCC TTTTCTCTGC AGGTGCTAGT TCTTGGAGTT 006960 006961 TTGGGGAGGT GGGAGGTAAC AGCACAATAT CTTTGAACTA TATACATCCT TGATGTATAA TTTGTCAGGA GCTTGACTTG 007040 007041 ATTGTATATT CATATTTACA CGAGAACCTA ATATAACTGC CTTGTCTTTT TCAGGTAATA GCCTGCAGCT GGTGTTTTGA 007120 007121 GAAGCCCTAC TGCTGAAAAC TTAACAATTT TGTGTAATAA AAATGGAGAA GCTCTA |
Predicted Small Protein
Name | NONHSAT022137_smProtein_1766:1909 |
Length | 48 |
Molecular weight | 5699.6696 |
Aromaticity | 0.170212765957 |
Instability index | 45.444893617 |
Isoelectric point | 5.60491943359 |
Runs | 4 |
Runs residual | 0.081170212766 |
Runs probability | 0.0421082847552 |
Amino acid sequence | MPVCQGHRESEWLVKIREVGNMLFFWNLLMVTFYLFSNIMGEFRTEV |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |