NONHSAT022137

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT022137

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

7176 nt

Genomic location

chr11+:65266430..65273938

Exon number

2

Exons

65266430..65271270,65271604..65273938

Genome context

Sequence
000001 CCTCACAAAG GCGGCGGAAG GTGATCGAAT TCCGGTGATG CGAGTTGTTC TCCGTCTATA AATACGCCTC GCCCGAGCTG 000080
000081 TGCGGTAGGC ATTGAGGCAG CCAGCGCAGG GGCTTCTGCT GAGGGGGCAG GCGGAGCTTG AGGAAACCGC AGATAAGTTT 000160
000161 TTTTCTCTTT GAAAGATAGA GATTAATACA ACTACTTAAA AAATATAGTC AATAGGTTAC TAAGATATTG CTTAGCGTTA 000240
000241 AGTTTTTAAC GTAATTTTAA TAGCTTAAGA TTTTAAGAGA AAATATGAAG ACTTAGAAGA GTAGCATGAG GAAGGAAAAG 000320
000321 ATAAAAGGTT TCTAAAACAT GACGGAGGTT GAGATGAAGC TTCTTCATGG AGTAAAAAAT GTATTTAAAA GAAAATTGAG 000400
000401 AGAAAGGACT ACAGAGCCCC GAATTAATAC CAATAGAAGG GCAATGCTTT TAGATTAAAA TGAAGGTGAC TTAAACAGCT 000480
000481 TAAAGTTTAG TTTAAAAGTT GTAGGTGATT AAAATAATTT GAAGGCGATC TTTTAAAAAG AGATTAAACC GAAGGTGATT 000560
000561 AAAAGACCTT GAAATCCATG ACGCAGGGAG AATTGCGTCA TTTAAAGCCT AGTTAACGCA TTTACTAaac gcagacgaaa 000640
000641 atggaaagat taattgggag tggtaggatg aaacaatttg gagaagatag aagtttgaag tggaaaactg gaagacagaa 000720
000721 gtacgggaag gcgaagaaaa gaatagagaa gatagggaaa ttagaagata aaaacatact tttagaagaa aaaagataaa 000800
000801 tttaaacctg aaaagtagga agcagaagaa aaaagacaag ctaggaaaca aaaagctaag ggcaaaatgt acaaacttag 000880
000881 aagaaaattg gaagatagaa acaagataga aaatgaaaat attgtcaaga gtttcagata gaaaatgaaa aacaagctaa 000960
000961 gacaagtatt ggagaagtat agaagataga aaaatataaa gccaaaaatt ggataaaata gcactgaaaa aatgaggaaa 001040
001041 ttattggtaa ccaatttaTT TTAAAAGCCC ATCAATTTAA TTTCTGGTGG TGCAGAAGTT AGAAGGTAAA GCTTGAGAAG 001120
001121 ATGAGGGTGT TTACGTAGAC CAGAACCAAT TTAGAAGAAT ACTTGAAGCT AGAAGGGGAA GTTGGTTAAA AATCACATCA 001200
001201 AAAAGCTACT AAAAGGACTG GTGTAATTTA AAAAAAACTA AGGCAGAAGG CTTTTGGAAG AGTTAGAAGA ATTTGGAAGG 001280
001281 CCTTAAATAT AGTAGCTTAG TTTGAAAAAT GTGAAGGACT TTCGTAACGG AAGTAATTCA AGATCAAGAG TAATTACCAA 001360
001361 CTTAATGTTT TTGCATTGGA CTTTGAGTTA AGATTATTTT TTAAATCCTG AGGACTAGCA TTAATTGACA GCTGACCCAG 001440
001441 GTGCTACACA GAAGTGGATT CAGTGAATCT AGGAAGACAG CAGCAGACAG GATTCCAGGA ACCAGTGTTT GATGAAGCTA 001520
001521 GGACTGAGGA GCAAGCGAGC AAGCAGCAGT TCGTGGTGAA GATAGGAAAA GAGTCCAGGA GCCAGTGCGA TTTGGTGAAG 001600
001601 GAAGCTAGGA AGAAGGAAGG AGCGCTAACG ATTTGGTGGT GAAGCTAGGA AAAAGGATTC CAGGAAGGAG CGAGTGCAAT 001680
001681 TTGGTGATGA AGGTAGCAGG CGGCTTGGCT TGGCAACCAC ACGGAGGAGG CGAGCAGGCG TTGTGCGTAG AGGATCCTAG 001760
001761 ACCAGCATGC CAGTGTGCCA AGGCCACAGG GAAAGCGAGT GGTTGGTAAA AATCCGTGAG GTCGGCAATA TGTTGTTTTT 001840
001841 CTGGAACTTA CTTATGGTAA CCTTTTATTT ATTTTCTAAT ATAATGGGGG AGTTTCGTAC TGAGGTGTAA AGGGATTTAT 001920
001921 ATGGGGACGT AGGCCGATTT CCGGGTGTTG TAGGTTTCTC TTTTTCAGGC TTATACTCAT GAATCTTGTC TGAAGCTTTT 002000
002001 GAGGGCAGAC TGCCAAGTCC TGGAGAAATA GTAGATGGCA AGTTTGTGGG TTTTTTTTTT TTACACGAAT TTGAGGAAAA 002080
002081 CCAAATGAAT TTGATAGCCA AATTGAGACA ATTTCAGCAA ATCTGTAAGC AGTTTGTATG TTTAGTTGGG GTAATGAAGT 002160
002161 ATTTCAGTTT TGTGAATAGA TGACCTGTTT TTACTTCCTC ACCCTGAATT CGTTTTGTAA ATGTAGAGTT TGGATGTGTA 002240
002241 ACTGAGGCGG GGGGGAGTTT TCAGTATTTT TTTTTGTGGG GGTGGGGGCA AAATATGTTT TCAGTTCTTT TTCCCTTAGG 002320
002321 TCTGTCTAGA ATCCTAAAGG CAAATGACTC AAGGTGTAAC AGAAAACAAG AAAATCCAAT ATCAGGATAA TCAGACCACC 002400
002401 ACAGGTTTAC AGTTTATAGA AACTAGAGCA GTTCTCACGT TGAGGTCTGT GGAAGAGATG TCCATTGGAG AAATGGCTGG 002480
002481 TAGTTACTCT TTTTTCCCCC CACCCCCTTA ATCAGACTTT AAAAGTGCTT AACCCCTTAA ACTTGTTATT TTTTACTTGA 002560
002561 AGCATTTTGG GATGGTCTTA ACAGGGAAGA GAGAGGGTGG GGGAGAAAAT GTTTTTTTCT AAGATTTTCC ACAGATGCTA 002640
002641 TAGTACTATT GACAAACTGG GTTAGAGAAG GAGTGTACCG CTGTGCTGTT GGCACGAACA CCTTCAGGGA CTGGAGCTGC 002720
002721 TTTTATCCTT GGAAGAGTAT TCCCAGTTGA AGCTGAAAAG TACAGCACAG TGCAGCTTTG GTTCATATTC AGTCATCTCA 002800
002801 GGAGAACTTC AGAAGAGCTT GAGTAGGCCA AATGTTGAAG TTAAGTTTTC CAATAATGTG ACTTCTTAAA AGTTTTATTA 002880
002881 AAGGGGAGGG GCAAATATTG GCAATTAGTT GGCAGTGGCC TGTTACGGTT GGGATTGGTG GGGTGGGTTT AGGTAATTGT 002960
002961 TTAGTTTATG ATTGCAGATA AACTCATGCC AGAGAACTTA AAGTCTTAGA ATGGAAAAAG TAAAGAAATA TCAACTTCCA 003040
003041 AGTTGGCAAG TAACTCCCAA TGATTTAGTT TTTTTCCCCC CAGTTTGAAT TGGGAAGCTG GGGGAAGTTA AATATGAGCC 003120
003121 ACTGGGTGTA CCAGTGCATT AATTTGGGCA AGGAAAGTGT CATAATTTGA TACTGTATCT GTTTTCCTTC AAAGTATAGA 003200
003201 GCTTTTGGGG AAGGAAAGTA TTGAACTGGG GGTTGGTCTG GCCTACTGGG CTGACATTAA CTACAATTAT GGGAAATGCA 003280
003281 AAAGTTGTTT GGATATGGTA GTGTGTGGTT CTCTTTTGGA ATTTTTTTCA GGTGATTTAA TAATAATTTA AAACTACTAT 003360
003361 AGAAACTGCA GAGCAAAGGA AGTGGCTTAA TGATCCTGAA GGGATTTCTT CTGATGGTAG CTTTTGTATT ATCAAGTAAG 003440
003441 ATTCTATTTT CAGTTGTGTG TAAGCAAGTT TTTTTTTAGT GTAGGAGAAA TACTTTTCCA TTGTTTAACT GCAAAACAAG 003520
003521 ATGTTAAGGT ATGCTTCAAA AATTTTGTAA ATTGTTTATT TTAAACTTAT CTGTTTGTAA ATTGTAACTG ATTAAGAATT 003600
003601 GTGATAGTTC AGCTTGAATG TCTCTTAGAG GGTGGGCTTT TGTTGATGAG GGAGGGGAAA CTTTTTTTTT TTCTATAGAC 003680
003681 TTTTTTCAGA TAACATCTTC TGAGTCATAA CCAGCCTGGC AGTATGATGG CCTAGATGCA GAGAAAACAG CTCCTTGGTG 003760
003761 AATTGATAAG TAAAGGCAGA AAAGATTATA TGTCATACCT CCATTGGGGA ATAAGCATAA CCCTGAGATT CTTACTACTG 003840
003841 ATGAGAACAT TATCTGCATA TGCCAAAAAA TTTTAAGCAA ATGAAAGCTA CCAATTTAAA GTTACGGAAT CTACCATTTT 003920
003921 AAAGTTAATT GCTTGTCAAG CTATAACCAC AAAAATAATG AATTGATGAG AAATACAATG AAGAGGCAAT GTCCATCTCA 004000
004001 AAATACTGCT TTTACAAAAG CAGAATAAAA GCGAAAAGAA ATGAAAATGT TACACTACAT TAATCCTGGA ATAAAAGAAG 004080
004081 CCGAAATAAA TGAGAGATGA GTTGGGATCA AGTGGATTGA GGAGGCTGTG CTGTGTGCCA ATGTTTCGTT TGCCTCAGAC 004160
004161 AGGTATCTCT TCGTTATCAG AAGAGTTGCT TCATTTCATC TGGGAGCAGA AAACAGCAGG CAGCTGTTAA CAGATAAGTT 004240
004241 TAACTTGCAT CTGCAGTATT GCATGTTAGG GATAAGTGCT TATTTTTAAG AGCTGTGGAG TTCTTAAATA TCAACCATGG 004320
004321 CACTTTCTCC TGACCCCTTC CCTAGGGGAT TTCAGGATTG AGAAATTTTT CCATCGAGCC TTTTTAAAAT TGTAGGACTT 004400
004401 GTTCCTGTGG GCTTCAGTGA TGGGATAGTA CACTTCACTC AGAGGCATTT GCATCTTTAA ATAATTTCTT AAAAGCCTCT 004480
004481 AAAGTGATCA GTGCCTTGAT GCCAACTAAG GAAATTTGTT TAGCATTGAA TCTCTGAAGG CTCTATGAAA GGAATAGCAT 004560
004561 GATGTGCTGT TAGAATCAGA TGTTACTGCT AAAATTTACA TGTTGTGATG TAAATTGTGT AGAAAACCAT TAAATCATTC 004640
004641 AAAATAATAA ACTATTTTTA TTAGAGAATG TATACTTTTA GAAAGCTGTC TCCTTATTTA AATAAAATAG TGTTTGTCTG 004720
004721 TAGTTCAGTG TTGGGGCAAT CTTGGGGGGG ATTCTTCTCT AATCTTTCAG AAACTTTGTC TGCGAACACT CTTTAATGGA 004800
004801 CCAGATCAGG ATTTGAGCGG AAGAACGAAT GTAACTTTAA GAGGCATTTC ATCCTTCATG AAGCCATTCA GGATTTTGAA 004880
004881 TTGCATATGA GTGCTTGGCT CTTCCTTCTG TTCTAGTGAG TGTATGAGAC CTTGCAGTGA GTTTATCAGC ATACTCAAAA 004960
004961 TTTTTTTCCT GGAATTTGGA GGGATGGGAG GAGGGGGTGG GGCTTACTTG TTGTAGCTTT TTTTTTTTTT ACAGACTTCA 005040
005041 CAGAGAATGC AGTTGTCTTG ACTTCAGGTC TGTCTGTTCT GTTGGCAAGT AAATGCAGTA CTGTTCTGAT CCCGCTGCTA 005120
005121 TTAGAATGCA TTGTGAAACG ACTGGAGTAT GATTAAAAGT TGTGTTCCCC AATGCTTGGA GTAGTGATTG TTGAAGGAAA 005200
005201 AAATCCAGCT GAGTGATAAA GGCTGAGTGT TGAGGAAATT TCTGCAGTTT TAAGCAGTCG TATTTGTGAT TGAAGCTGAG 005280
005281 TACATTTTGC TGGTGTATTT TTAGGTAAAA TGCTTTTTGT TCATTTCTGG TGGTGGGAGG GGACTGAAGC CTTTAGTCTT 005360
005361 TTCCAGATGC AACCTTAAAA TCAGTGACAA GAAACATTCC AAACAAGCAA CAGTCTTCAA GAAATTAAAC TGGCAAGTGG 005440
005441 AAATGTTTAA ACAGTTCAGT GATCTTTAGT GCATTGTTTA TGTGTGGGTT TCTCTCTCCC CTCCCTTGGT CTTAATTCTT 005520
005521 ACATGCAGGA ACACTCAGCA GACACACGTA TGCGAAGGGC CAGAGAAGCC AGACCCAGTA AGAAAAAATA GCCTATTTAC 005600
005601 TTTAAATAAA CCAAACATTC CATTTTAAAT GTGGGGATTG GGAACCACTA GTTCTTTCAG ATGGTATTCT TCAGACTATA 005680
005681 GAAGGAGCTT CCAGTTGAAT TCACCAGTGG ACAAAATGAG GAAAACAGGT GAACAAGCTT TTTCTGTATT TACATACAAA 005760
005761 GTCAGATCAG TTATGGGACA ATAGTATTGA ATAGATTTCA GCTTTATGCT GGAGTAACTG GCATGTGAGC AAACTGTGTT 005840
005841 GGCGTGGGGG TGGAGGGGTG AGGTGGGCGC TAAGCCTTTT TTTAAGATTT TTCAGGTACC CCTCACTAAA GGCACCGAAG 005920
005921 GCTTAAAGTA GGACAACCAT GGAGCCTTCC TGTGGCAGGA GAGACAACAA AGCGCTATTA TCCTAAGGTC AAGAGAAGTG 006000
006001 TCAGCCTCAC CTGATTTTTA TTAGTAATGA GGACTTGCCT CAACTCCCTC TTTCTGGAGT GAAGCATCCG AAGGAATGCT 006080
006081 TGAAGTACCC CTGGGCTTCT CTTAACATTT AAGCAAGCTG TTTTTATAGC AGCTCTTAAT AATAAAGCCC AAATCTCAAG 006160
006161 CGGTGCTTGA AGGGGAGGGA AAGGGGGAAA GCGGGCAACC ACTTTTCCCT AGCTTTTCCA GAAGCCTGTT AAAAGCAAGG 006240
006241 TCTCCCCACA AGCAACTTCT CTGCCACATC GCCACCCCGT GCCTTTTGAT CTAGCACAGA CCCTTCACCC CTCACCTCGA 006320
006321 TGCAGCCAGT AGCTTGGATC CTTGTGGGCA TGATCCATAA TCGGTTTCAA GGTAACGATG GTGTCGAGGT CTTTGGTGGG 006400
006401 TTGAACTATG TTAGAAAAGG CCATTAATTT GCCTGCAAAT TGTTAACAGA AGGGTATTAA AACCACAGCT AAGTAGCTCT 006480
006481 ATTATAATAC TTATCCAGTG ACTAAAACCA ACTTAAACCA GTAAGTGGAG AAATAACATG TTCAAGAACT GTAATGCTGG 006560
006561 GTGGGAACAT GTAACTTGTA GACTGGAGAA GATAGGCATT TGAGTGGCTG AGAGGGCTTT TGGGTGGGAA TGCAAAAATT 006640
006641 CTCTGCTAAG ACTTTTTCAG GTGAACATAA CAGACTTGGC CAAGCTAGCA TCTTAGCGGA AGCTGATCTC CAATGCTCTT 006720
006721 CAGTAGGGTC ATGAAGGTTT TTCTTTTCCT GAGAAAACAA CACGTATTGT TTTCTCAGGT TTTGCTTTTT GGCCTTTTTC 006800
006801 TAGCTTAAAA AAAAAAAAAG CAAAAGATGC TGGTGGTTGG CACTCCTGGT TTCCAGGACG GGGTTCAAAT CCCTGCGGCG 006880
006881 TCTTTGCTTT GACTACTAAT CTGTCTTCAG GACTCTTTCT GTATTTCTCC TTTTCTCTGC AGGTGCTAGT TCTTGGAGTT 006960
006961 TTGGGGAGGT GGGAGGTAAC AGCACAATAT CTTTGAACTA TATACATCCT TGATGTATAA TTTGTCAGGA GCTTGACTTG 007040
007041 ATTGTATATT CATATTTACA CGAGAACCTA ATATAACTGC CTTGTCTTTT TCAGGTAATA GCCTGCAGCT GGTGTTTTGA 007120
007121 GAAGCCCTAC TGCTGAAAAC TTAACAATTT TGTGTAATAA AAATGGAGAA GCTCTA
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Predicted Small Protein

Name NONHSAT022137_smProtein_1766:1909
Length 48
Molecular weight 5699.6696
Aromaticity 0.170212765957
Instability index 45.444893617
Isoelectric point 5.60491943359
Runs 4
Runs residual 0.081170212766
Runs probability 0.0421082847552
Amino acid sequence MPVCQGHRESEWLVKIREVGNMLFFWNLLMVTFYLFSNIMGEFRTEV
Secondary structure LLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEELL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL
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