NONHSAT022080
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT022080 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1484 nt |
Genomic location |
chr11-:64888106..64889589 |
Exon number |
1 |
Exons |
64888106..64889589 |
Genome context |
|
Sequence |
000001 CTTCGCGGTA GCTGGGACCG CCGTTCAGGT AAGAATGGGG CCTTGGCTGG ATCCGAAGGG CTTGTAGCAG GTTGGCTGCG 000080
000081 GGGTCAGAAG GCGCGGGGGG AACCGAAGAA CGGGGCCTGC TCCGTGGCCC TGCTCCAGTC CCTATCCGAA CTCCTTGGGA 000160 000161 GGCCTGGCCT TCCCCACGTG AGCCGCCGCG ACCACCATCC CGTCGCGATC GTTTCTGGAC CGCTTTCCAC TCCCAAATCT 000240 000241 CCTTTATCCC AGAGCATTTC TTGGCTTCTC TTACAAGCCG TCTTTTCTTT ACTCAGTCGC CAATATGCAG CTCTTTGTCC 000320 000321 GCGCCCAGGA GCTACACACC TTCGAGGTGA CCGGCCAGGA AACGGTCGCC CAGATCAAGG TAAGGCTGCT TGGTGCGCCC 000400 000401 TGGGTTCCAT TTTCTTGTGC TCTTCACTCT CGCGGCCCGA GGGAACGCTT ACGAGCCTTA TCTTTCCCTG TAGGCTCATG 000480 000481 TAGCCTCACT GGAGGGCATT GCCCCGGAAG ATCAAGTCGT GCTCCTGGCA GGCGCGCCCC TGGAGGATGA GGCCACTCTG 000560 000561 GGCCAGTGCG GGGTGGAGGC CCTGACTACC CTGGAAGTAG CAGGCCGCAT GCTTGGAGGT GAGTGAGAGA GGAATGTTCT 000640 000641 TTGAAGTACC GGTAAGCGTC TAGTGAGTGT GGGGTGCATA GTCCTGACAG CTGAGTGTCA CACCTATGGT AATAGAGTAC 000720 000721 TTCTCACTGT CTTCAGTTCA GAGTGATTCT TCCTGTTTAC ATCCCTCATG TTGAACACAG ACGTCCATGG GAGACTGAGC 000800 000801 CAGAGTGTAG TTGTATTTCA GTCACATCAC GAGATCCTAG TCTGGTTATC AGCTTCCACA CTAAAATTAG GTCAGACCAG 000880 000881 GGCCCCCAAA GTGCTCTATA AAATTAGAAG CTGGAAGATC CTGAAATGAA ACTTAAGATT TCAAGGTCAA ATATCTGCAA 000960 000961 CTTTGTTCTC ATTACCTATT GGGCGCAGCT TCTCTTTAAA GGCTTGAATT GAGAAAAGAG GGGTTCTGCT GGGTGGCACC 001040 001041 TTCTTGCTCT TACCTGCTGG TGCCTTCCTT TCCCACTACA GGTAAAGTCC ATGGTTCCCT GGCCCGTGCT GGAAAAGTGA 001120 001121 GAGGTCAGAC TCCTAAGGTG AGTGAGAGTA TTAGTGGTCA TGGTGTTAGG ACTTTTTTTC CTTTCACAGC TAAACCAAGT 001200 001201 CCCTGGGCTC TTACTCGGTT TGCCTTCTCC CTCCCTGGAG ATGAGCCTGA GGGAAGGGAT GCTAGGTGTG GAAGACAGGA 001280 001281 ACCAGGGCCT GATTAACCTT CCCTTCTCCA GGTGGCCAAA CAGGAGAAGA AGAAGAAGAA GACAGGTCGG GCTAAGCGGC 001360 001361 GGATGCAGTA CAACCGGCGC TTTGTCAACG TTGTGCCCAC CTTTGGCAAG AAGAAGGGCC CCAATGCCAA CTCTTAAGTC 001440 001441 TTTTGTAATT CTGGCTTTCT CTAATAAAAA AGCCACTTAG TTCA |
Predicted Small Protein
Name | NONHSAT022080_smProtein_767:928 |
Length | 54 |
Molecular weight | 6114.1749 |
Aromaticity | 0.0754716981132 |
Instability index | 42.0113207547 |
Isoelectric point | 10.6371459961 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0431509941315 |
Amino acid sequence | MLNTDVHGRLSQSVVVFQSHHEILVWLSASTLKLGQTRAPKVLYKIRSWKILK |
Secondary structure | LLLLLLLLLLLLEEEEELLLHHHHHHHHHHHLLLLLLLLHHHHEEEHHHHLLL |
PRMN | - |
PiMo | - |