NONHSAT018456
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT018456 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1552 nt |
Genomic location |
chr11+:26067534..26069145 |
Exon number |
2 |
Exons |
26067534..26068322,26068383..26069145 |
Genome context |
|
Sequence |
000001 ATAGTACAGC CAGGGAAGCT GCCCAAGGAA CAGAAGCTGA AGCTGTAGAA TGATCATGGG CGAGAGGTTT TATTTAGAAT 000080
000081 CTGCTCATGT TTGCCTAATA AATGTAGCAG CCACAGCAAA TGAAATTCTT AAAATCTTAG TATTAACAGG TATTGATTCA 000160 000161 TTTACCATTA TTGATGAAAA TCAGGTCAGC ACAGAAGGTG GTGGATACAT TACTTTTTCC TTCAAACGAG CAGTATCACA 000240 000241 AGAACTGAGC TTGAGTTACC ATGGAATTCT TATAATTAAA GATGCCTCTA CAACCTTTGT GGAAAAGTCC AGAAAACCTT 000320 000321 CCAAACAGTG ATCTTTTGTT TTCCTGTATT TTCACCACTG TGGTTGCGAT TTGGCTTCCT GAAAGTACAT TACGATGCTT 000400 000401 CCTGATGTCC TCAGGAATTC TCAAATCCCT CTTTTAAACT TTAAGACATA TAGACCAGTT GGCCATAGAA GGATCATTTT 000480 000481 AAAAGAATAC ACAATAATAG AATTTTACCC AGATAGTGTA TTCAAGATCT GTGACTGGAT AAATTGTTTT CTGAGCTGAG 000560 000561 AGAATATTTC AGTCTTATAT TTTAGATCAT ATGTTAAAAA AACCATAGCC ATACCCCAAA GATTGTGATC ACAGCTAAAT 000640 000641 ATTTAGTACA GTAGAGTAGT AAAACAAATG GGTGAATATC TAAAATGTAT GAAGAAAAAG AGCACTTCAG AGATTTGATT 000720 000721 ATACAAAAGA TTCTAAATAG TACAAATAGG ACTTCAGAAG ATGAAAAGAA TTCTGAAGAA ACTATTAAAA ATATGAACAT 000800 000801 GGCAATAAAT ACTACTTAGA TACCAAACaa tatttaagat atatttaata ataatttCTG AATAAATATC AGCAAACAGA 000880 000881 CTTCATCCTT TGGGGTTTTG GCTTATGCCT TAAAGGAATT TGTGGCCAAG GAAGGTCAAG GAAATTTACC TATTCAAGAA 000960 000961 CAATTTCTGA CACAATTGCC AACTGGAAAA AATATATAAA TACACAAAAT ATTTACTGTG TGAAAGCAAA TTAATATGTT 001040 001041 TCCCCTGTGA ATAAATCATG CCAACAAAAT GCTGCAGTCC ATAGACCAGG TGACCAATGA CATTGCAAAG AAAGAATTAA 001120 001121 AATTACTCTG TAGCAATTCT TCATTTCTTA GAGTCTGAAG ATGTGAATCC TTTACTGAAG AATATGGTTT GGATACAATT 001200 001201 AACGGGAATA AAATCTTTTC CAGCATGGGC ACGGCAGATA ATGAAATAGT ATTGTACTTA ATATTATGGA CTAGTGATAG 001280 001281 ATTTTATATG CAACAATATA GATGTCCATG GATATCTAAC TATCAAGTTG AAGAAAATTT AGGAAAGTGA AAGTCTTGTT 001360 001361 TTACTGGTTT CCTTCAGGAA TATAGATTCT CTAGTCACAG ATTTTGTAAA AATGGAGCTG TTGAGAAACA CACTATTGAT 001440 001441 TCCTGAGAGG AGGTGCTACT CAAAAGATTA TCGAAATACT CACTAAACAA TTAGTAATTG TTAATAACAT ATTTATCTTG 001520 001521 GCATGTCACA AACTCCAGCA ACTTCTCAGT TG |
Predicted Small Protein
Name | NONHSAT018456_smProtein_281:436 |
Length | 52 |
Molecular weight | 5785.857 |
Aromaticity | 0.117647058824 |
Instability index | 85.4196078431 |
Isoelectric point | 5.93267822266 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0412863844236 |
Amino acid sequence | MPLQPLWKSPENLPNSDLLFSCIFTTVVAIWLPESTLRCFLMSSGILKSLF |
Secondary structure | LLLLLLLLLLLLLLLLLLEEELEEEEEEEEELLLLHHHHHHHHLHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTiiiiiii |