NONHSAT018205
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT018205 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
664 nt |
Genomic location |
chr11-:17095940..17099215 |
Exon number |
5 |
Exons |
17095940..17096013,17096644..17096744,17097001..17097170,17098715..17098793,17098976..17099215 |
Genome context |
|
Sequence |
000001 TCCTTTCGTT GCCTGATCGC CGCCATCATG GGTCGCATGC ATGCTCCCGG GTGAGCTCGG GGCATCAAGC CGGATTGCTG 000080
000081 GGCGGGGGGT GGGAGGAAGA CAGGGAGTGT GGGCAGCGGG CCGAGGGGAT GATGTTCTGG GCTGCTCTGG CACTAGCCGC 000160 000161 CACCTCACCT CGAGACTGCT TCTCTCCCCA GGAAGGGCCT GTCCCAGTCG GCTTTACCCT ATCGACGCAG CGTCCCCACT 000240 000241 TGGTTGAAGT TGACATCTGA CGACGTGAAG GAGCAGATTT ACAAACTGGC CAAGAAGGGC CTTACTCCTT CACAGATCGG 000320 000321 TGTAATCCTG AGAGATTCAC ATGGTGTTGC ACAAGTACGT TTTGTGACAG GCAATAAAAT TTTAAGAATT CTTAAGTCTA 000400 000401 AGGGACTTGC TCCTGATCTT CCTGAAGATC TCTACCATTT AATTAAGAAA GCAGTTGCTG TTCGAAAGCA TCTTGAGAGG 000480 000481 AACAGAAAGG ATAAGGATGC TAAATTCCGT CTGATTCTAA TAGAGAGCCG GATTCACCGT TTGGCTCGAT ATTATAAGAC 000560 000561 CAAGCGAGTC CTCCCTCCCA ATTGGAAATA TGAATCATCT ACAGCCTCTG CCCTGGTCGC ATAAATTTGT CTGTGTACTC 000640 000641 AAGCAATAAA ATGATTGTTT AACT |
Predicted Small Protein
Name | NONHSAT018205_smProtein_128:259 |
Length | 44 |
Molecular weight | 4687.3771 |
Aromaticity | 0.093023255814 |
Instability index | 43.9372093023 |
Isoelectric point | 4.74920654297 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0347237994297 |
Amino acid sequence | MMFWAALALAATSPRDCFSPQEGPVPVGFTLSTQRPHLVEVDI |
Secondary structure | LHHHHHHHHHHLLLLLLLLLLLLLLLLLEEELLLLLEEEEEEL |
PRMN | - |
PiMo | - |