NONHSAT018115
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT018115 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1202 nt |
Genomic location |
chr11+:13777574..13779107 |
Exon number |
2 |
Exons |
13777574..13777922,13778255..13779107 |
Genome context |
|
Sequence |
000001 GCAGCCTCCC GGGCCTGTGG GTACAAGATA TTCAAAGAAC ACTTTAGAAA GAACACATTC CATGAAAAGT AAAGCTGCTC 000080
000081 AAAAGTACAT GTCTATTGAT ATGTTCAATT TTCCTGATAA TTCTGATATC TCAAGCATTG GCAGTCTAGA TGAAAATGAG 000160 000161 AAAGATGAAG AACCTTAGGA AGGCTTTCAT CCTCCTTTAC ACAACACAGC TATATATGCT GATGAAGAAT TATTCTCCTG 000240 000241 ACATTGTGGA TTATCTATCT CTTCAAATCC CCCAGGAAAC AAAGCAAAAA GAAGTTCAGA CACTTCTGAA AATAAAGCAA 000320 000321 GTGAAAACAA ATCTGCAAAA ATTAGTGCAA AGCCAGGAAG AAAACACAAG CCCATTCATA ATGACTGGGA AAGTACTGAA 000400 000401 GAAAGTGATG TAAGAAGAAA AGCTAAATCA GCAGACAAAA TGGGTACACA ATGACACGAG GCTATTCCTC CAACTACAGC 000480 000481 ATCTTCAGAA CTTTCAGAGA AACCAGCTGA GTTGATCACT TCTAAAAAGA TAGGACCTCT TAGTGCCCAG CCCTCTGTTG 000560 000561 ATAAAGAGAT CTTGGCAACA GAAATTTAAT TGAAAACTCA GAAAAAAGGA AAGATGTCTT ATGACAAAAG GAAGAAATCA 000640 000641 AGAAGTAAAG CCATTGACTC AGATACTTCC AACATTGTGC ATATTTGGTG TCTATAAGAA AACCAGTAAC ATCATGGAGT 000720 000721 TGAATATTGT TTTGCCCACA GTTGAGAAAA TCCTCCTAGA GTATAAACAA AGAATAGAAT CTAAAATTTG TAAGAAAGCC 000800 000801 ATCAACACAT TTTATTTTAA CATTAAAAAG AACCCATCAA AAAGTTTAAA GAAGTCCAGA TGTTGAAAAA CTTGAAAAGG 000880 000881 AAGAATGCTA AGATGATTTC AGATATTGAA AAGGCAACGT TTGATTGAAG TTTAGGATGA ACTGCTTCCA TTAGAGCCAC 000960 000961 AGCTGAAACA ACTACAAACA AAATGTGATA AACTTAAGGA GAGAAAGTCT TCCCTTAGGA ATGCAGCATA TTTCTTATCT 001040 001041 AATTTAAAAT GGCTTTATCA AGATTATCAG ATGTTCAGGA GAAAGAAGCA AACATAAAGG AAACGTATAA TTCAACCAGC 001120 001121 CTTCCAGCTC TGTTATCTTA ACAATTTTGG GAGCTGAAAA TCACCTGCAA AATATCAACC ATCAATTAGA GAAGCTCCTT 001200 001201 GA |
Predicted Small Protein
Name | NONHSAT018115_smProtein_149:412 |
Length | 88 |
Molecular weight | 10340.3918 |
Aromaticity | 0.0689655172414 |
Instability index | 50.1287356322 |
Isoelectric point | 9.99822998047 |
Runs | 10 |
Runs residual | 0.0233169129721 |
Runs probability | 0.0191927221339 |
Amino acid sequence | MKMRKMKNLRKAFILLYTTQLYMLMKNYSPDIVDYLSLQIPQETKQKEVQTLLKIKQVKT NLQKLVQSQEENTSPFIMTGKVLKKVM |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHH HHHHHHHHHHLLLLLLEEEHHHHHHLL |
PRMN | - |
PiMo | - |