NONHSAT017773
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT017773 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
3808 nt |
Genomic location |
chr11-:7448497..7528213 |
Exon number |
9 |
Exons |
7448497..7448885,7449104..7449275,7461358..7462950,7471604..7471673,7479027..7479174,7482470..7482567,7490872..7490997,7525997..7526103,7527110..7528213 |
Genome context |
|
Sequence |
000001 GGTTATACTC TGAATCTCCC ATTCCCCACA ACTATTCCGT ATCTGAAATC GAAAACTCCA ATATCCCACT CACCACAGTT 000080
000081 ATTCTTCCAT TGCTCACTCC TTTGCTCATG CCTTCCAGTC CCTTGGCCTC TACTTTCTCC CAGGTCATCA GCCCTCTCTT 000160 000161 CATCTTGCTT TCTTTCCTAT GCAGCCTAAA CCACTGTAAT AGCTCTCTCA CCAGCATTCT CACCCATCAA CCCCTAGTTA 000240 000241 TGCCACCATA TCCACCCAAC ACAAGTCCCT GGCCTAGGAT GAGTTCAAAC ATCTGCCTTG TCCCGGAGTT GAGTGTTGAT 000320 000321 GGAGGAGAAA ATCTCACAGT GGTGTATGTT GGTGCCACTA CACATAAGGG GTCTCCGATG TCAGCTGAGC CCTAAATACC 000400 000401 ATACTGGTCT TCATGGTTAG CCCACCATCT TCACACAATA GCTATCTTAT ATCTTCCCCA CACTGCCCCA CACACCCCGC 000480 000481 CCTGGCCAGT CCCTTCACCA ACAGCAGATT AACTCCTTTG AAAAAACAAA TACCATTAGA CATGAACTCT TTTCACTTCC 000560 000561 TCTCCTCACT TATAAACTTT TCTTTAGTTG TTCCCCTGTC GCTACCCTCA CACACATCTT AGAAGAAACT GTGTCATTTC 000640 000641 TCCTGTCCAA GACTAATATA TTCACTTGTA CTGTGATCTC ATCCTTTCCT GGCTTCTTCT AGACTTCCTT GATGAATTAT 000720 000721 CCCTTTTCTG TTATCTTTAA TTTCTCCTTT GTTACTAGAT TCTTAGCTTA TAAGCATCTA GCCTATATTA AAACAACAAC 000800 000801 AACAATTCAC CTTCAACTAG GCACCTTTTT CTAGTTGCTT CATTTCTCTT TCCATCATTT TACAGCCAGC TTCTCCTACA 000880 000881 GAGTAGGCTA TACTCTGTAT CTACATCTTC ACCTCCCATT CTTTTACTTC ACCATAACTC CATAGAAATT ATTCTTTATA 000960 000961 ATGTTACCAG GAACCTTATA ACTGAAAACT CAAATAGACC TTTTGTGTCC ATATTTTACT TGATCTTTCT GGAGCATGGT 001040 001041 CAGTTCTTCC TCCTTGAAGA TTGATATGAA TCAGGATAAG ATCAGCTCTA CTGGTCATTT CAAGCCCACT GAAGGTCAAC 001120 001121 TGGAGTCAGA GGACAAGAAA CAGGATGAAG GAAAGAAGAC TGGACAGGAG GAAGAGAGAT GCATAGTGAG ATGGGTTCCA 001200 001201 GAGGTTCGGA GAGAGACAGG GCCTTGCTCT GTCACCCAGG CTGAAATGCA GTGTTGCAAT CTTGGCTCGC TGTAGCCTCA 001280 001281 AGCTCTTGGA CTCAGGCGAT TCTCCTATCT CAGCTTCCTA AGTAGCTGGG ACTACAGGGC TCAGTGTGGT CAAAAGAAGA 001360 001361 CTATAGAATC AAGGATGAAG AGAAGGAACA CAGAATAAAA GGACGTCTCA GCAGGAAGCT CTGTGACTAC TATGTCAAAT 001440 001441 GATGCCATAC AGTGAAGCAC CTTGAAAGAT TGCTGGGATA AGCTGACAGC ATGGCAGCCA AAATAGTGAC CCCAGGCTTG 001520 001521 CAGGAATTCT GTGCTTTCTG GAGGAAATGG TCATGGGTTT CCCAACCTGC CTTTTAAACT AAGGACCGAG CTGAAGAAGC 001600 001601 CCCCGTCTTC CAGCGCATGT TATTCCCATG ACAGATGCTA AAAGTTCAAG GGGAGAGCTA CAAGAAGTGC GTTTTCCTGT 001680 001681 GGCTACTTTC ATGTCTGGAT GCAATGCCTA GACCTGCATC CATCTTGCGA CCAACCTGAA GATGAACAGA AAGGAAGGAA 001760 001761 GGATGGCCCA ATAGCCTGGG AAGAACTGGT GTTCCTGATA CCATCATTAA CCACAGAATC TACAATCCCG GAACCCCCCA 001840 001841 TCCTTAACCA TGGAATCTAC AATCCTATCT CTAGACCCTT TGTCCAGATG CTACAGTTTC TTTGTTCAAT CTAGTTTGTG 001920 001921 TCAGGATTTC TGTTCATTAC ATCAAAAGTA TTCTAATACT TGTAGCAAAG CAACTGGAGA AGTTTTCACT TTGTCTTTAA 002000 002001 CCAAAGAAGA CTTCCAGGAA ACATCTCCTC AGTGGGTTTC TCCCTCACCA CTGGATTTTT ATCTCTGTAC TAGTGCTTTG 002080 002081 ATTTGTTTTA GGAGTCTCAC CTCTCCACCT GTCATATTTC CCTGGCAGGC TCATTTCTGC TAATGCCCAC AATATGTGTA 002160 002161 TCAATGAGCT TTCAACGTTA GGTACACAGC TCTTCAGGCA TGTATAGCAC ATTAATCTGT CTGCTTCTAA GTGGTCTGTT 002240 002241 GACATGTTTG GGTGCCAGTT ATATCTACAA GGCTGTGATC ATTGTCCTGG GTTATTCTGT TTGTTCTCTC TGCAGGATGC 002320 002321 ATTAGGACAC CCAAGGCCAT GGCCATCACT TACATCTAGG ATTCAATCTT ATCCCCTGTG AATCACTGGA AACCTCCTGT 002400 002401 CCTGGAACCC TTTTTTTTCC ACATCCCACT GGATGTCATT CATAGCAACT GGTCTTGTGG GTTGTCTATT TTATTGTGTT 002480 002481 GTCTTACTCT TCCTCCTGGT ATCAGTTTTT AAATCCTCTT GATGAGATCA GCTGATCAGT CGCTAAGCAA CATAGTCCCC 002560 002561 CATGTCTTTG TAAGATTCTC TGCACTCATG GCTAGAATGA TTTATTCTGG TATCTTAAGC TGTGTTTCAG AACCTCATTC 002640 002641 TAAATATCAA CCTATTCTTG TAAGTCCACT ACAGATCATC TTTAGATATT CTTCAGTCTT CCAGAGTTCC AAAGGGCAGT 002720 002721 AGGAAGAAGC AATGAAAATA CCACCTGTAT TCTCACATCT TTCATTGTTC CACTCAAAAA ATACCACCAT GTTCACTTCT 002800 002801 GGTGGAACGT TTATGTCCAT GAGAAGCAGT GGCTTTGAAG AGTTTTGGCA GACTATGGCG CCTTACTCAA CATTGGGAAG 002880 002881 GTATCTTGCC ATCAGACCTT TTGGGTCTCC ATGAAACTTC TTATACCCCC TCTGGGAAAA GTCACTAACT GTGATCTTAC 002960 002961 TGAGCTTCTA AACACAGCAT TTTTTTTACA CTTAAGTGAG CGGGGGTCCT CCTCATTTGT GCTTCTCTTC TTGTAAGGGT 003040 003041 GACTTCCTCC CAGTAGGATG AATCTCATGC CTATTTGTGT TATTTTGCTA ATTCCAGCTT CTTTTCTACT CAGGGGGGTT 003120 003121 CCAACTCTTT TAAGGTCTCA TCTTCAGCAC TTCTAAACTG TGGGAAACTA TGTGAAAACA AATGGAGTGG CCAAACACAC 003200 003201 CATTCATCAC TGTGCTTCTG GACAGCTGCA AGTCCATACG TGTTCTGATA ATTCAATACA AGAAAGAAGA TTTGCTTGGG 003280 003281 AAGGTCTGAA TGGCCCTAGC TTTGTTTGTT AACCATAACC TCTACCAGCT GGAAACACAA TGCCCCACTA ATACTAACAG 003360 003361 TGCCTGCTTG TCCAAACAGC ATTCTGGCCA CTTACAGCAA TTGACACAAA TTCTAACAGG TAGATGGGGC AAAGCATTAC 003440 003441 CTTGTGTAAA ACTGCTGCTA TAATATATTC CTAGTGAGAA AGGTCAACTT GTGGGCTAAA GTCCTTGTCA CCTCCTGATC 003520 003521 AGTTTTCACT TAGGGCACAG CAGTCTGCCA TTCACCATTG GGATCTCTGT GTGTTTCTTC TCTCTTATGA AAGGACATAT 003600 003601 TGAGCGCTCT AGGACTTGGC TGCCTACATC AAGTAGAGGG GGACCCTCAT GATTCACTAA GGGGCCTCAG TTCTGAATAT 003680 003681 TTCTCATTAT TCAAAAATGC AAAGCCATTG TCATTACGTG GCAGTTTATT GGAACCAAGG GAGGAATTGG TCCCTTTTCA 003760 003761 TGTTCTTCTC CTAAATAGAG AAAAGGTAAT TAAAACTTGG AGCTTAAT |
Predicted Small Protein
Name | NONHSAT017773_smProtein_107:394 |
Length | 96 |
Molecular weight | 10140.6216 |
Aromaticity | 0.0631578947368 |
Instability index | 76.6684210526 |
Isoelectric point | 5.75103759766 |
Runs | 14 |
Runs residual | 0.0183174471612 |
Runs probability | 0.0429126605597 |
Amino acid sequence | MPSSPLASTFSQVISPLFILLSFLCSLNHCNSSLTSILTHQPLVMPPYPPNTSPWPRMSS NICLVPELSVDGGENLTVVYVGATTHKGSPMSAEP |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLHHHEEELLLEELLLLLLLLLLLLLLLL LEEEELEEEELLLLEEEEEEEEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |