NONHSAT017773

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT017773

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

3808 nt

Genomic location

chr11-:7448497..7528213

Exon number

9

Exons

7448497..7448885,7449104..7449275,7461358..7462950,7471604..7471673,7479027..7479174,7482470..7482567,7490872..7490997,7525997..7526103,7527110..7528213

Genome context

Sequence
000001 GGTTATACTC TGAATCTCCC ATTCCCCACA ACTATTCCGT ATCTGAAATC GAAAACTCCA ATATCCCACT CACCACAGTT 000080
000081 ATTCTTCCAT TGCTCACTCC TTTGCTCATG CCTTCCAGTC CCTTGGCCTC TACTTTCTCC CAGGTCATCA GCCCTCTCTT 000160
000161 CATCTTGCTT TCTTTCCTAT GCAGCCTAAA CCACTGTAAT AGCTCTCTCA CCAGCATTCT CACCCATCAA CCCCTAGTTA 000240
000241 TGCCACCATA TCCACCCAAC ACAAGTCCCT GGCCTAGGAT GAGTTCAAAC ATCTGCCTTG TCCCGGAGTT GAGTGTTGAT 000320
000321 GGAGGAGAAA ATCTCACAGT GGTGTATGTT GGTGCCACTA CACATAAGGG GTCTCCGATG TCAGCTGAGC CCTAAATACC 000400
000401 ATACTGGTCT TCATGGTTAG CCCACCATCT TCACACAATA GCTATCTTAT ATCTTCCCCA CACTGCCCCA CACACCCCGC 000480
000481 CCTGGCCAGT CCCTTCACCA ACAGCAGATT AACTCCTTTG AAAAAACAAA TACCATTAGA CATGAACTCT TTTCACTTCC 000560
000561 TCTCCTCACT TATAAACTTT TCTTTAGTTG TTCCCCTGTC GCTACCCTCA CACACATCTT AGAAGAAACT GTGTCATTTC 000640
000641 TCCTGTCCAA GACTAATATA TTCACTTGTA CTGTGATCTC ATCCTTTCCT GGCTTCTTCT AGACTTCCTT GATGAATTAT 000720
000721 CCCTTTTCTG TTATCTTTAA TTTCTCCTTT GTTACTAGAT TCTTAGCTTA TAAGCATCTA GCCTATATTA AAACAACAAC 000800
000801 AACAATTCAC CTTCAACTAG GCACCTTTTT CTAGTTGCTT CATTTCTCTT TCCATCATTT TACAGCCAGC TTCTCCTACA 000880
000881 GAGTAGGCTA TACTCTGTAT CTACATCTTC ACCTCCCATT CTTTTACTTC ACCATAACTC CATAGAAATT ATTCTTTATA 000960
000961 ATGTTACCAG GAACCTTATA ACTGAAAACT CAAATAGACC TTTTGTGTCC ATATTTTACT TGATCTTTCT GGAGCATGGT 001040
001041 CAGTTCTTCC TCCTTGAAGA TTGATATGAA TCAGGATAAG ATCAGCTCTA CTGGTCATTT CAAGCCCACT GAAGGTCAAC 001120
001121 TGGAGTCAGA GGACAAGAAA CAGGATGAAG GAAAGAAGAC TGGACAGGAG GAAGAGAGAT GCATAGTGAG ATGGGTTCCA 001200
001201 GAGGTTCGGA GAGAGACAGG GCCTTGCTCT GTCACCCAGG CTGAAATGCA GTGTTGCAAT CTTGGCTCGC TGTAGCCTCA 001280
001281 AGCTCTTGGA CTCAGGCGAT TCTCCTATCT CAGCTTCCTA AGTAGCTGGG ACTACAGGGC TCAGTGTGGT CAAAAGAAGA 001360
001361 CTATAGAATC AAGGATGAAG AGAAGGAACA CAGAATAAAA GGACGTCTCA GCAGGAAGCT CTGTGACTAC TATGTCAAAT 001440
001441 GATGCCATAC AGTGAAGCAC CTTGAAAGAT TGCTGGGATA AGCTGACAGC ATGGCAGCCA AAATAGTGAC CCCAGGCTTG 001520
001521 CAGGAATTCT GTGCTTTCTG GAGGAAATGG TCATGGGTTT CCCAACCTGC CTTTTAAACT AAGGACCGAG CTGAAGAAGC 001600
001601 CCCCGTCTTC CAGCGCATGT TATTCCCATG ACAGATGCTA AAAGTTCAAG GGGAGAGCTA CAAGAAGTGC GTTTTCCTGT 001680
001681 GGCTACTTTC ATGTCTGGAT GCAATGCCTA GACCTGCATC CATCTTGCGA CCAACCTGAA GATGAACAGA AAGGAAGGAA 001760
001761 GGATGGCCCA ATAGCCTGGG AAGAACTGGT GTTCCTGATA CCATCATTAA CCACAGAATC TACAATCCCG GAACCCCCCA 001840
001841 TCCTTAACCA TGGAATCTAC AATCCTATCT CTAGACCCTT TGTCCAGATG CTACAGTTTC TTTGTTCAAT CTAGTTTGTG 001920
001921 TCAGGATTTC TGTTCATTAC ATCAAAAGTA TTCTAATACT TGTAGCAAAG CAACTGGAGA AGTTTTCACT TTGTCTTTAA 002000
002001 CCAAAGAAGA CTTCCAGGAA ACATCTCCTC AGTGGGTTTC TCCCTCACCA CTGGATTTTT ATCTCTGTAC TAGTGCTTTG 002080
002081 ATTTGTTTTA GGAGTCTCAC CTCTCCACCT GTCATATTTC CCTGGCAGGC TCATTTCTGC TAATGCCCAC AATATGTGTA 002160
002161 TCAATGAGCT TTCAACGTTA GGTACACAGC TCTTCAGGCA TGTATAGCAC ATTAATCTGT CTGCTTCTAA GTGGTCTGTT 002240
002241 GACATGTTTG GGTGCCAGTT ATATCTACAA GGCTGTGATC ATTGTCCTGG GTTATTCTGT TTGTTCTCTC TGCAGGATGC 002320
002321 ATTAGGACAC CCAAGGCCAT GGCCATCACT TACATCTAGG ATTCAATCTT ATCCCCTGTG AATCACTGGA AACCTCCTGT 002400
002401 CCTGGAACCC TTTTTTTTCC ACATCCCACT GGATGTCATT CATAGCAACT GGTCTTGTGG GTTGTCTATT TTATTGTGTT 002480
002481 GTCTTACTCT TCCTCCTGGT ATCAGTTTTT AAATCCTCTT GATGAGATCA GCTGATCAGT CGCTAAGCAA CATAGTCCCC 002560
002561 CATGTCTTTG TAAGATTCTC TGCACTCATG GCTAGAATGA TTTATTCTGG TATCTTAAGC TGTGTTTCAG AACCTCATTC 002640
002641 TAAATATCAA CCTATTCTTG TAAGTCCACT ACAGATCATC TTTAGATATT CTTCAGTCTT CCAGAGTTCC AAAGGGCAGT 002720
002721 AGGAAGAAGC AATGAAAATA CCACCTGTAT TCTCACATCT TTCATTGTTC CACTCAAAAA ATACCACCAT GTTCACTTCT 002800
002801 GGTGGAACGT TTATGTCCAT GAGAAGCAGT GGCTTTGAAG AGTTTTGGCA GACTATGGCG CCTTACTCAA CATTGGGAAG 002880
002881 GTATCTTGCC ATCAGACCTT TTGGGTCTCC ATGAAACTTC TTATACCCCC TCTGGGAAAA GTCACTAACT GTGATCTTAC 002960
002961 TGAGCTTCTA AACACAGCAT TTTTTTTACA CTTAAGTGAG CGGGGGTCCT CCTCATTTGT GCTTCTCTTC TTGTAAGGGT 003040
003041 GACTTCCTCC CAGTAGGATG AATCTCATGC CTATTTGTGT TATTTTGCTA ATTCCAGCTT CTTTTCTACT CAGGGGGGTT 003120
003121 CCAACTCTTT TAAGGTCTCA TCTTCAGCAC TTCTAAACTG TGGGAAACTA TGTGAAAACA AATGGAGTGG CCAAACACAC 003200
003201 CATTCATCAC TGTGCTTCTG GACAGCTGCA AGTCCATACG TGTTCTGATA ATTCAATACA AGAAAGAAGA TTTGCTTGGG 003280
003281 AAGGTCTGAA TGGCCCTAGC TTTGTTTGTT AACCATAACC TCTACCAGCT GGAAACACAA TGCCCCACTA ATACTAACAG 003360
003361 TGCCTGCTTG TCCAAACAGC ATTCTGGCCA CTTACAGCAA TTGACACAAA TTCTAACAGG TAGATGGGGC AAAGCATTAC 003440
003441 CTTGTGTAAA ACTGCTGCTA TAATATATTC CTAGTGAGAA AGGTCAACTT GTGGGCTAAA GTCCTTGTCA CCTCCTGATC 003520
003521 AGTTTTCACT TAGGGCACAG CAGTCTGCCA TTCACCATTG GGATCTCTGT GTGTTTCTTC TCTCTTATGA AAGGACATAT 003600
003601 TGAGCGCTCT AGGACTTGGC TGCCTACATC AAGTAGAGGG GGACCCTCAT GATTCACTAA GGGGCCTCAG TTCTGAATAT 003680
003681 TTCTCATTAT TCAAAAATGC AAAGCCATTG TCATTACGTG GCAGTTTATT GGAACCAAGG GAGGAATTGG TCCCTTTTCA 003760
003761 TGTTCTTCTC CTAAATAGAG AAAAGGTAAT TAAAACTTGG AGCTTAAT
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Predicted Small Protein

Name NONHSAT017773_smProtein_107:394
Length 96
Molecular weight 10140.6216
Aromaticity 0.0631578947368
Instability index 76.6684210526
Isoelectric point 5.75103759766
Runs 14
Runs residual 0.0183174471612
Runs probability 0.0429126605597
Amino acid sequence MPSSPLASTFSQVISPLFILLSFLCSLNHCNSSLTSILTHQPLVMPPYPPNTSPWPRMSS
NICLVPELSVDGGENLTVVYVGATTHKGSPMSAEP
Secondary structure LLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLHHHEEELLLEELLLLLLLLLLLLLLLL
LEEEELEEEELLLLEEEEEEEEEEELLLLLLLLLL
PRMN -
PiMo -