NONHSAT017077
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT017077 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
648 nt |
Genomic location |
chr10-:134325130..134331751 |
Exon number |
3 |
Exons |
134325130..134325665,134331598..134331695,134331746..134331751 |
Genome context |
|
Sequence |
000001 CTGAAGCGGG AGCTGTTGGG GGCTCCTTCC CTCGCAGCAG TGACCACTCC AAGGACCACG GCCTGGACAT GAGCGGCAGC 000080
000081 GGTGAGCTGG GAGCTGCTGG CCTGGAGTCT AGATGAATAT AGGCAGCAGC CAAAGGCCAC AGTCACGACA AACCTACACA 000160 000161 CTCTCACCAC TGTCATCTCA TATTGTCCTA AAATTTCCAG CCAGTGCAAA AAAACATGAA AAAGAAAAAA TACAGCCATT 000240 000241 GGAAAAGAGG AAAAGTAATT GTTATTAGCT GATGATGTGA ATGTCTTCCT GAAAACCTTA AGAGAACCAA CTGGAAAACA 000320 000321 ACCAGAAATG AGAGCATGGA GTTAGGCAAC CGCCGATCTG CTTTCTGTCA CTTTGGGCGA GTTTTTCCCG TCCTGGGATT 000400 000401 TCATATCTCT GGAATCCTGC AGTACGTAGC CCTCTGTCTG GCTTCCTCGC TCCGTGTAAT GTTCTTGAGA TTCATCCATG 000480 000481 CAGCTGTGTA TACCTGCAGT GATTGTTTCT CTTGTTGATT GCTGAGAAGG GTTCCATCGT ATGCCTTTTC CAGTTTATTT 000560 000561 GTTCATCTGT TGTTAGACAT TTGAGTTATT TCCAGCTTGG GACTCTTATG AACAAAACTG CTATAAACAT GCATATTCAA 000640 000641 AAAAAAAA |
Predicted Small Protein
Name | NONHSAT017077_smProtein_335:517 |
Length | 61 |
Molecular weight | 6762.973 |
Aromaticity | 0.15 |
Instability index | 66.3666666667 |
Isoelectric point | 8.78814697266 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0205794029323 |
Amino acid sequence | MELGNRRSAFCHFGRVFPVLGFHISGILQYVALCLASSLRVMFLRFIHAAVYTCSDCFSC |
Secondary structure | LLLLLLLLHHHHLLLEEELLHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooooooooooooo |