NONHSAT016635
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016635 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
907 nt |
Genomic location |
chr10-:121334731..121336726 |
Exon number |
4 |
Exons |
121334731..121335303,121336123..121336262,121336359..121336417,121336592..121336726 |
Genome context |
|
Sequence |
000001 TTCTTTCTTA GATTTTCAAC CCATGAAAGT GCAGCCCATG CCATTGTTTC GGTGAACGGT ACTACGATTG AAGGACATGT 000080
000081 GGTTAAATGC TATTGGGGTA AAGAATCTCC TGATATGACT AAAAACTTCC AACAGGTGTC ACCACCCCAA TAAACTTAGA 000160 000161 CAATGATAAA TAACAGAGTC CTATTCACAT AAGGGTTGAC TATAGTCAAT GGGGCCAATG GAGCCAAGTG TATGGAAACC 000240 000241 CACAACAGTA TGGACAGTAT ATGGCAAATG GGTGGCAAGT ACCGCCTTAT GGAGTATACG GGCAACCATG GAATCAACAA 000320 000321 GGATTTGGAG TAGATCAATC ACCTTCTGCT GCTTGGATGG GTGGATTTGG TGCTCAGCCT CCCCAAGGAC AAGCTCCTCC 000400 000401 CCCTGTAATA CCTCCTCCTA ACCAAGCCGG ATATGGTATG GCAAGTTACC AAACACAGTG AGCCGGGACT CTAAAAAAAA 000480 000481 ATTGTAATTC ATGATAGGCT TCGATTTCCT GTGACACTCT GAAGACATGA AAGTAGACAT CGGAAAATGa aaatatttat 000560 000561 tttaaaaatt GAAATGTTTG GAACCTTTAG CACAGATTTG CTTTGGTGAA GGACACGTGT CTTCTAGTTC TGCCTTTTTA 000640 000641 AGTTTTTGTT CATGATGGAT ATGAACATGA TTTTTCTTTA TGTACAAAAA CTAAAATAAA GTCAATAAAG ACAATTCTGA 000720 000721 CTACAAATTT TGATATAATA GGAAAAATGG CTAATACATT TTGATTCTTA GATACTATTC CATTTTTATC TTGCTGTTCA 000800 000801 GTATTTTAAC TCACTGTGTT TTTAAAAGAG CAAAAAAGGG AGGATCGTGA AAACCTGGGA ATCACATATA AGTTCATCCT 000880 000881 GAATCCTGAT ACTCCCCTCC CCTTCCC |
Predicted Small Protein
Name | NONHSAT016635_smProtein_260:460 |
Length | 67 |
Molecular weight | 6946.5992 |
Aromaticity | 0.136363636364 |
Instability index | 59.3833333333 |
Isoelectric point | 3.79937744141 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.0408938350116 |
Amino acid sequence | MANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMGGFGAQPPQGQAPPPVIPPPNQAGYGM ASYQTQ |
Secondary structure | LLLLLLLLLLLEELLLLLLLLEEELLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLEEE EEEEEL |
PRMN | - |
PiMo | - |