NONHSAT016477
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016477 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
768 nt |
Genomic location |
chr10+:117226684..117357492 |
Exon number |
5 |
Exons |
117226684..117226762,117228682..117228839,117278773..117278834,117308968..117309046,117357103..117357492 |
Genome context |
|
Sequence |
000001 TCGAACAAAA ATCTGGATAT ATCAATTAAT GCATCAAACA ACTTTAATCT CAACATTACG TGGTCTGTCG GTTCAACAGC 000080
000081 TGGAACAATA TCTGGGGAAG AGACTTCTAT AGTTTCCAAG AATAATATAA AGGAATACAG AGATAGTTTT TCCTATGAAA 000160 000161 AATTTAACTT TAGAAGCAAT CCTAACATTA CATTCTATGT GTACGTCAGC AACTTTTCCT GGCCTATTAA AATACAGATT 000240 000241 GCATTCTCAC AACACAATAC AATCATGGAC CTTGTGCAGT TTTTTGTCAC CTTCTTCAGT TGTTTCCTAT CCTTATTGCT 000320 000321 GGTGGCTGCT GTGGTATGGA AGATCAAACA AACTTGTTGG GCTTCTCGAC GGAGAGAGac agagtcacac tcttgtcacc 000400 000401 caggctggcg tgcagtgtgg ggatctcagc tcactgcaac ctccgcatcc tgggtcaagc aattctccat tacaggcgcc 000480 000481 cactaccacg ctcagctaat ttttgtattt tttagtagag atggggtttc accatgttgg ccagactgga cctcaggcga 000560 000561 tctgcccacc tcggcctcct aaagtgctgg gattacaggc gtgagccacc gcgccgggcc TCTATGTGAA CTCTTTAAAT 000640 000641 TTAGACATTT TCAACAACAT TGCTGTTCAT TTCTGTAGTA GATTAAGGTG TGTTCATATA ACTGAACTTC TAAACTCGTG 000720 000721 ATATATAGAT TATttttggc ctaaacagtg ttttaaaaat ttaaaaag |
Predicted Small Protein
Name | NONHSAT016477_smProtein_335:514 |
Length | 60 |
Molecular weight | 6672.7022 |
Aromaticity | 0.0677966101695 |
Instability index | 54.6288135593 |
Isoelectric point | 9.21038818359 |
Runs | 11 |
Runs residual | 0.0419841393251 |
Runs probability | 0.0342615342615 |
Amino acid sequence | MEDQTNLLGFSTERDRVTLLSPRLACSVGISAHCNLRILGQAILHYRRPLPRSANFCIF |
Secondary structure | LLLLLLLLLLLLLLLEEEELLLLEEEELLEEELLLHHHHHHHHHHHLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |