NONHSAT016068
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT016068 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2633 nt |
Genomic location |
chr10-:103461537..103489881 |
Exon number |
4 |
Exons |
103461537..103462052,103464210..103464764,103467922..103469073,103489472..103489881 |
Genome context |
|
Sequence |
000001 CGCCCAGACT GGAGTGCAGT GGCGCAATCT CGGCTCACTG CAAGCTCTGT CTTCCGGGTT CATGCCATTC TCCTGCCTCA 000080
000081 GCCTCCTGAG TAGCTGGGAC TACAGGCGCC CGCCATTACG CCCGGCTAAT TTTATTTTAT TTTATTTTTA GTAGAGACAG 000160 000161 GGTTTCACTG TGTTAGCCAG GATGGTCTGT GTCTCCTGAC CTCGTGATCC ACCCGCCTCG GCCTCCCAAA GTGCTGGGAT 000240 000241 TACAAAATGC GTGAGCCACC ACGCCCGGCT GATGGTTTTA TTAATATAAG GGACTTTAAC CCTTTGCTCA GGACTTCTAC 000320 000321 TTGCTGCTGC CATGTGAAGA AGGACATATT TGCTTCCCCT TTCACCATGA TTGTAAGTTT CCTGAGGCCT CCCCAGCCCT 000400 000401 GCAGAACTGT ACACACATAT ACATATCCTT AAAGAATTAC AATATTGTTT TGTGTTAAAT ATTTTTGTAT ATATTGCTCT 000480 000481 GAATGTATTT TGCTTATGTC GCTCAACTTG ATGTTTTTGC CACCTATCCA CATATATGTT TTGTTCCTCT TTTGGACTTA 000560 000561 ATGTTTTAAA GGAAGAAACC AAGGAGGAAG AGGTTTATTC ACACAAGAAC AGCTATCTGT ACCTATGTTT CCGCCTGTCT 000640 000641 CTGATTGGAG ACTGAAGTCA GGAGGACTTC TTGGAAGAAG CAAGGAACTG AATTTGGTTT TTGAAAGAGA CTGAGAAAAT 000720 000721 GCTGAGTGTG AATGTTGTGG GGGCATTTCA GAGATACCCC TTACAATAAT TCCATAGACT AGGAATTGTG AGATTTGTTG 000800 000801 TATGATCTTT CTTTCATTAT TTAGTTATAG ATTCTATGGC TTTTTAAATA TTTAGGTTAG ACAAATGTTT TGACTGTGGA 000880 000881 AGATACATTT AAAAAGGGAT GCTAAACAAA TCAAGATTTA CTAAAACTGA ACAACAGAAA TCCTGTAAAA CACTATCATT 000960 000961 TAAGCCCAAC AGGTGGACAC ACAAACCAAT TACAAATCAA AGAGGCTTTG ATCCATGGAG TCTTTGGTGT ATGCCGAATA 001040 001041 AAATACATTC AAAATGTATT TGTAGTGTGA GATAAAGATA TAAAGGTCAC TTTGTAAGTG CTGCCTATGT TAGTAGTTTT 001120 001121 AATTTTACCT TGTCAGTGCC TCTGTGTACA AAACTGAAGA AAGCAAGACT TTGATTTGTT CAGGTTTCCT TAAGGAGGGA 001200 001201 CACAGAATCC TTGAAGCATG ATTTGAAAAA GATGGATAAG ATATTCTACC CAAAATTCAA CATCACCTTT AATCTTGCCC 001280 001281 TCTCCTCCTC TAATCCCTAG GTAATGTTTT GTGCTTCTTT TGCAGAAAAG CAATTTTGTT AATCACTTTA GCACCAATTC 001360 001361 TTGCATCCCT GGCAATACTC AGAACTGCTT CCATCCAAGT CTTTGATGTG GGAAAGAAAC ACACACACAC TCTTTCGCAT 001440 001441 GTAATCTGAA AACAATTCAC CTCTTGCCAA TGAATGCACA GCACTCCACT TTAATAGAGA GCAAGTTCTG TGGAGGTTTC 001520 001521 TAATCCTTTC TGCCAAAGAA GAGAAGAGAG AGAATCACTC AGTGTGAGTC ACCGAGCCCG GCCAGAGATG GAGATCTTGA 001600 001601 GAGATTATAA AGGTGCTGGG TTGTGCCACA TATCTGCTGA GCTTGGTGCA GTGTAGGGAA TGCATGAGCA CCTGGTCAAA 001680 001681 AATTCCTCTC TACTCATTAG TTGCTGCATA GCATTTACAG ACCCACACCC TTGCCAAGAG ATAATTTGAG CTCTTAGCTC 001760 001761 TGTCTTGCCA GGGCTGATAT CGATGTAATT ATTGTTTGAT TCTACTATAA GACTGAATTC AGTTTCAGCT TTTTAATTTG 001840 001841 TCCATTTCAC TTCTCATTTA TCAGCTTCTA TTGCAGATGT GAAGTTTAGC ATTTCTTTGC TCACTCTTTT ACTGGGAAAC 001920 001921 TCTTCTAGCG GAAAGCCTGT CATCTGTTGT GAAGGAGAGC TGGTGTTGAC TTGAAGCAAC AGAGTTGGTG GTCCAGTGGC 002000 002001 CATTGTCCTG TGTTAGGAGC AGGTGGTCTC GCTAAGCTCC ATGTGTTTGG AAATTTCTCT GACCAGTGCT TGTTCTGCTA 002080 002081 AAGGAAGAAG AGCTCAAGCT GCACTCCTTG TTTCCAGGAT CCCATCCAGA ATACATTACC TTTAGTCATC ATGTCTCCTG 002160 002161 TGGCTCTTCT TGGCTGTGAC AGTTTCTCAG CTTTCCCAGT TTTAATGAAC TTGCCATTTT CATCAGATTG TACCAAGACC 002240 002241 TACTATCAAT ATGACTTATG ACTAGTGGTG CTGACCTTGA TCACCTGGCT GAGGTAGTTC TTGTCAGGCT TCTCCACTGT 002320 002321 CGAGTTGCTC TCCCCATCCC CCTTTTCCAT ATTGTACTCT TTGAAAGAAA GTCACTATAT GCAGCCCTTC CTTAAAAATA 002400 002401 TTAAAATGAA CTAGCTTAAT TAAGTTCTTT CTTACATTTA GGTGTAAATA CCTCTGAGGT TTTTTTCTTT TAAAAAATGA 002480 002481 TTATCTATGT AATACATACT CACTGCACAA GACTTTAAAA ATGCAAGAAA AGTATAAAGC AGCAGCAAAT AGAACTACCC 002560 002561 ATAATTCCAT CTGTCACAAG CAACCATTTC TAGCTTTTTG TCATATTTCC TTCCAGTTTT TTTTCTTCTG CAT |
Predicted Small Protein
Name | NONHSAT016068_smProtein_2150:2260 |
Length | 37 |
Molecular weight | 4025.5974 |
Aromaticity | 0.166666666667 |
Instability index | 93.9 |
Isoelectric point | 3.92962646484 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.03549347667 |
Amino acid sequence | MSPVALLGCDSFSAFPVLMNLPFSSDCTKTYYQYDL |
Secondary structure | LLLEEEELLLLLLLLHHHLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |