NONHSAT013808
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013808 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
892 nt |
Genomic location |
chr10-:71353797..71354688 |
Exon number |
1 |
Exons |
71353797..71354688 |
Genome context |
|
Sequence |
000001 ACTATCCTTA TAGGGACTCT CATCACAATA ATAGGCTCAC ACTGACTTCT CATCTGAATG GGACTAGAGG TAAATATACG 000080
000081 AGCCATTATC CCAATTTTAA TTTAAAAACA AGCCTCCACT CCACAGAAGC AGCTACCAAC TATTTCCTTA CACAAGTACC 000160 000161 TGCATCCATA ATCCTGATAA TAGGGGTCAT TACCAATATA CCGTACTCCT GATGATGAAC AATCATAAAC TCAATCAATC 000240 000241 AAGTAGCATC CTTAATAATA ATGGCCTTAA CAATAAAATT AAGCATATCT CCTTTCCACT TTTGAGTCCC AGAAGTAACT 000320 000321 AAAGGAATCT CATTGACATC TGAGACAAAA TGTCACATGA CAAAAACTAG CCCCTATTTC CATTATATTT CAAATTTTCT 000400 000401 CCTCAATAAA CCCAAACATT TTACTAGCGG CCACAATGTT GTCTATTCTG TTAGGTGGCT GAGGAGGGCT CAACTAAACA 000480 000481 CAACTGTGAA AAATCTTAGC CTACTCATCA ATTGCTCACA TGAGCTGAAT AATTGCAATC TTAACATATA ACCCAAACAT 000560 000561 TACTATCCTA AACCTAATTA TTTATCTTAT CCTGACGGTA GCTATATTTA TAATACTTAG TTCAAGCATA GGCACTACAA 000640 000641 CTCTATCACT ATCCCACGGC TGAAATAAGA TACCATGACT AGTATCCATA ATCCTACTTA TCCTGTTATC CTTAGGAGAC 000720 000721 TTACCCCCAT TAATAGGGTT CCTATGCAAA TGGACTATTA TTCAAGAATT TACAAAAAAA CAATAGCCTT ATTATACCCA 000800 000801 CTATTATAGC TACCATAGCC CTATTCAATC TGTACTTTTA TATGTGCCTA ATCTACTCTA CTTCACTATC CCCTACATCT 000880 000881 AATAATATCA AA |
Predicted Small Protein
Name | NONHSAT013808_smProtein_356:550 |
Length | 65 |
Molecular weight | 7505.5788 |
Aromaticity | 0.109375 |
Instability index | 51.2265625 |
Isoelectric point | 9.92291259766 |
Runs | 12 |
Runs residual | 0.03890625 |
Runs probability | 0.0490564093506 |
Amino acid sequence | MTKTSPYFHYISNFLLNKPKHFTSGHNVVYSVRWLRRAQLNTTVKNLSLLINCSHELNNC NLNI |
Secondary structure | LLLLLLLEEEEEHHHLLLLLLLLLLLLEEEEEHHHHHHHHLHHHHLHHHEEELLLLLLLL LLLL |
PRMN | - |
PiMo | - |