NONHSAT013499
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT013499 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
813 nt |
Genomic location |
chr10+:60380609..60410627 |
Exon number |
2 |
Exons |
60380609..60380661,60409868..60410627 |
Genome context |
|
Sequence |
000001 TTACAGCTGC TGCTGAAGGG AAAGGCAGAA GTGGGGAAGA CTTTTTTCAA AAGTCACTAT CTACTGAAGA GATGATCTGC 000080
000081 AGCCCTGAAG AAGTTTGAAA GGAGAAAAGA ACAGTGCCAT TCCTAATGTA TATTTCCTCT CTCTGTCTCT TTCTCCCTGT 000160 000161 CTTCTTCCTT TACTCCACTG CCTCCCTTGC AAACCTGAGT TTCCTGAGCT GTTAACTCTA GCTGGTCATG Tggagtaggt 000240 000241 taactttgaa ttaactggtt atgagagtgg agtgttacat ttcactggac tgagtttctg atactacaag tgaccagaac 000320 000321 tttatggaat cttaccttaa tgttaataca tgagaaagag ggattccaga gagcacagtt aaaaacagtg atGGTGTCCT 000400 000401 ATCCCCACCA AATGATGATT ATTTTAGTGA GCTGGTTGTA TCAGCCTTCA ACTGTTTGGA CTATGTGAGG GGCTTGCAGT 000480 000481 CCAGTCAGGA TGACCCTGTC TTCAAGGGGT TGTGCCTATC ATCCATGGAA CATTGGCTAC ACTATTCTTA TTCATGGCTC 000560 000561 AAATGGGGCT GTCAGGATTC TAATTCCAGA CCTCAAGCTA CTTTGTGTTA CTAGCCTAGA GTAGGCTTTA CTGAAATAGC 000640 000641 TTATTTTGCT AAGTCAGACT TGTTTATTAC TGCATTTATT ATGTGCAGCA CACTCATATT CATTCATTCC TCCTTGGCTT 000720 000721 ATAATTTCTT TTCAATAAAA CTCAGGCTCC TCGTATCCTT TTTATAAGCT TTTCAAGTTA ACCTGGAGCT CCCCTTGTTA 000800 000801 AAAATAAATA AAT |
Predicted Small Protein
Name | NONHSAT013499_smProtein_524:613 |
Length | 30 |
Molecular weight | 3590.9757 |
Aromaticity | 0.206896551724 |
Instability index | 53.8275862069 |
Isoelectric point | 6.68548583984 |
Runs | 7 |
Runs residual | 0.0418103448276 |
Runs probability | 0.0419284831051 |
Amino acid sequence | MEHWLHYSYSWLKWGCQDSNSRPQATLCY |
Secondary structure | LLEEEEELHHHHHHLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |