NONHSAT012521

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT012521

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2066 nt

Genomic location

chr10+:29698483..29711299

Exon number

3

Exons

29698483..29698612,29704286..29704341,29709420..29711299

Genome context

Sequence
000001 GCTGCTGAAT AGCTGAGAGG CGCACCCGGG CGGCCAGCTG GGCTCGGAGT GCAGCGGGGT TAGGATGGAC GAGGACGTGT 000080
000081 TGCACCCTGA AGAGCCTCAT CATCGGTGAG AGTGGGGTGG GCAAGTCCAG CCTGCTCTTG AGGTTCACAG ATGATACCTT 000160
000161 TGATCCAGAA CTTGCAGCAA CAATAGACAA TGCAGGAATC ACATGAACCT GTCCATCCAC AGATAAAGTG GTAAAGAAAC 000240
000241 TGCCGTATTA GATACATGAT GGTATACTCT TCAGCCATAA AGCTTCGGGA AACCCTGTCA TCCGCAACCA CGTGGAGAAA 000320
000321 CCTGTCCATC CACAGATGAA GGGATCAGGA AGCTCTGGTA TATATACTGA AGGGAAATGC TTTTTGGCTA CCAAAATAAT 000400
000401 GAAATTTTGT TGTTTGGAGC AACACAGATG AACCTGTCCA TCCACAAATG AAGACATCAA GAAACTCTAG TATGTACACA 000480
000481 AGGCAAAACA CTTCAGCTAT CAAAATCATG ACATTATGTC ACTTGGAGCA ACACAGTTGA CCCGCCAAGG CAGCCTCTTC 000560
000561 CTCCATAGAT GGATGAACGC TGTGGCCGCT GCTCCTGCCT GGGCCATGCC CTGATGCTGC CAACACCACT GCTCCTCTAT 000640
000641 TTATAAGTCT TAGTAGAGTT GCTGACCCAG CAATAACTGA ACAGCTGATA TGTACCTCAC ACTAAGCCAG GCGCTTCATA 000720
000721 TGTATCTAAC TTGAAAAATG CTGAGCTAGT TACCTTAACA CCATTAACTT TTACTTAAAA GTTTGTTTTT CTTTTTTAAT 000800
000801 CCCAGTGAGC TCCAAACAAG TTTTAGGAGG CTCCCCAAAA CCAGTGAAGA CTTTAACTAA AAGTAGAATT TCAAAGTATT 000880
000881 AGAAACCAAA CCCCAAAATT AAATGTGAAG ATCAGTGTCT GTACTGAGCT GGCCCATCTG GTGGACACAG GATTTGCGTT 000960
000961 ATCGACTGCA ATGTTACCCA GGATTCACGA TTTCTAGCAT CTGTCAGGGT TAAGAAAATT GGATTGAGTA CCAAATACAG 001040
001041 CAGAGCAAAC CCGGCTTTGA GGCAAGGGCC CCATCAAGTA GTCATGCAGT ACTTTTGTTA GGGTTCTGGG TGCAAATCTT 001120
001121 CCTCGTCCCT CCCACCTTCT CCTGGCCTCC TTGTAAACCC AAACCGCCAG GTACCTCAAT TTTCTTCAAG ACCAGGCTGT 001200
001201 TCTTAATGTT GGTAAATTGG TCAAGGAAAT GGGTGAGCCA CTGCTTGCTC TGCACATCGT CCTCAGAGTG CTCGGTCTTC 001280
001281 AGGCAGTACA GCAGCTGCAT GGCTTTGGCC TGCAGGAGTA AGTGGCCCAT TCCTAGGCTG TCCCCAAAGA TGTGTCCTCT 001360
001361 GAAGAAGCTG GTCAGGTAGA GGGGGTGTCC ACTATGGTTA TAGATGGGGA AGGAGATGCT GCCCAGGTCG AGCGTTTTGT 001440
001441 CCACCTGCCA GGTGTACAGG AGTGGGTTGG GGGCACCACG CAGAGCATCT TGTACCTCGC GCACACCTGC TGGTACTGGA 001520
001521 GCTGGCTTGC GTTTCCCTGT GCCACACGCA GATCCTGCAC TGTACTGTCC AGTCAACTGA CTTCAGCAAA GATGTCTGGG 001600
001601 TTCAGCAGCG AGTTGCTGTG TGAGGCCACC AGAATGGAGG TGATATCGGC CTCAGTGCTC ATCCTGGAGG TGGAGAAGTG 001680
001681 GTCAGAGTCC TCTGTGGTGA AATGGCCCTA CACCAAAGTG GGAGACATTC AGAATCGAGG CGAAATTGGC CTCAGTGCTC 001760
001761 CTCTTGGAGG CAGAGAAGCA GTAGGAGTCG GTGGTGAAAT GGCCCTGTGT GAATGTGGAA GACCAGCAGA TTGGAGGTGG 001840
001841 AATTGGCCTC AGTGCTTGTC CTGGAGGTGG AGAAGCGGTC AGAGTCCTTG GTGGTGAAGT GGCCCTGCAC AAAACGTTGC 001920
001921 TCCCCCTTGG CCGGTGAAAG AATAAAAGAA AGCTGGCCAC TTGCATTTCC GTTTCAGTTT ATAGAATACA TGTTTTGGAA 002000
002001 ATAGTATCTT CTAGATCTGT CTTTTTCTCT TCTGATTTAA CTTAGTAAAG CTAAGTTTTA TCTCTT
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Predicted Small Protein

Name NONHSAT012521_smProtein_1403:1579
Length 59
Molecular weight 6089.9882
Aromaticity 0.051724137931
Instability index 67.7465517241
Isoelectric point 9.88458251953
Runs 9
Runs residual 0.0014209928003
Runs probability 0.0128854344541
Amino acid sequence MGKEMLPRSSVLSTCQVYRSGLGAPRRASCTSRTPAGTGAGLRFPVPHADPALYCPVN
Secondary structure LLEEELLLLLEEEHHHEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLL
PRMN -
PiMo -