NONHSAT012504

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT012504

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

406 nt

Genomic location

chr10+:29135882..29137154

Exon number

2

Exons

29135882..29135957,29136825..29137154

Genome context

Sequence
000001 TCCTGTGGTT AATGATATGA GAAACAGAAT GCCTCTCCAG AAACCTTTTC ACATCCCAGA TTCAGAGTTC CTGAGGCAAT 000080
000081 GGAATTGGCT GCTTGTTGCT CAATTGAATT GAGGCTCTAC ATTAGGATAA TGAAAAGCTG TAGGCAGTTA GGGAGCAATT 000160
000161 GAAAGCCACT TGTGAAGGCC TGAGGGCCTC CAGGAATGGG GCCCATATTC ACTCCATTCA GTGTAGAAAA AGCAGAAGAC 000240
000241 CAAACTATGG ATTTAATAGG CTTGCCTAGC TTCAAAGATG ATTATCATTA CACAAAGATC AGAGCACTGG TTGGGAAAAC 000320
000321 ATGGAGCTCT TGTGCACGGG ATGGGGACAT TTGGGTGGAT GCCTCCAAAT ATTTTGAGCT CTCAAACTCT TCTAAGCCCT 000400
000401 CAGAGC
[back to top]

Predicted Small Protein

Name NONHSAT012504_smProtein_320:376
Length 19
Molecular weight 1978.3604
Aromaticity 0.111111111111
Instability index 59.6
Isoelectric point 5.22210693359
Runs 5
Runs residual 0.0116959064327
Runs probability 0.041688747571
Amino acid sequence MELLCTGWGHLGGCLQIF
Secondary structure LEEEELLLLHHHHHHHLL
PRMN -
PiMo -