NONHSAT011933

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT011933

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3476 nt

Genomic location

chr10-:28811787..28821695

Exon number

2

Exons

28811787..28814937,28821371..28821695

Genome context

Sequence
000001 CTGCAGCGGC TGCGCGTGCG CCCAGAGGCG CAGCGGGAGG GGGTGCTCTC GGGCGAGCTC TCCGGCCGCG GCCCCCGCCC 000080
000081 CTGCGCTGTC GGGCGGGGAG GTCGGAAACC CCCTGGCGAG ACCACGGGCG GACGCTTCCC GAAGAGCTGC CTGGGCTGCA 000160
000161 GCCGCGGAAG CTGCGTTCTG GGGAGCGGGG AGCGTGCTCC GGCGCCTTCG GGCCGCTGCT GGAAGCCGGA ACCGAGCCCG 000240
000241 GGCCGCTGCC CCTCACCGGA CGCCGCGCGC CACCGGCCCT CCGCGGGGCA GGGGCTGCTG CGAGCTCGCC GGGCGCCCTT 000320
000321 TAGACagtcg tccttgtcta ctccactacc aaatgttgaa gttcttcaag aatcagtcct tTGGAGgtga tgtcattgaa 000400
000401 aatgatgagt aggaaactcc aagagcgcat ttctccacaa aaccagtgaa tacattggca caaattgtca gaatcaattt 000480
000481 tatataaatt ctggaaatta gtcaaaggtt tatagtaacc aaggaaacat ctttttaaaa agatggctga ggctggatgc 000560
000561 tgtggcttat acctgtaatc ccagcacttt gagaggccaa ggcgagcaga gcatttgagt caggagttag agaccagcaa 000640
000641 aaaaattagc tgggtgtgtt tgcgggcacc tgtaatccct cagggaggct gaggcaggag aatcgcttga acctggaaga 000720
000721 tggaggttgc agtgagccaa gatcgtgcca cctcactcca gcctgggtga tagagtgaga ctctgtctca aaaaaaaaaa 000800
000801 aaaaaaaaag tctgaatcct gaatctcagg agcgctttct atcatttaaa cttaccctgg tgccacctcc ctgtccagct 000880
000881 ttgaaaacaa cgacatgcat ttctgatatc tgttcctggt gccaaaggga gcaggatggc cttgttttct tttcttcttt 000960
000961 cttttttttt tttgagatgg agttttgccc gtgttgccca ggctggagtg cagtggcgca atctcggctc acagcaacct 001040
001041 ccgcctcccg gcttcaagcg attctcctgc ctcaacctcc cgagtagctg ggattacagg cacttgccac catgcctgac 001120
001121 caatttttgt atttttagtt gagacgggat tttgccatgt tggctaggct ggtctcgaac tcctgacctc aggtgatccg 001200
001201 cccacctcag cctcccaaag tgctgggatt acaggcatga gccactgtgc ctggccgtgg accttctttt caaagaatta 001280
001281 tggaggctta ttttagttcc cctaacttgg aaatctcctg aggaagaaag gtgactacag gcatttgtca aaaatttgta 001360
001361 aaggcaagtt tattagcctc tgccatcggg ggcaaagaat aatagctaag gcaaacaata gacacaccaa aaagcctggg 001440
001441 aggaaaagct ggaaagtaag atattttgga gaataaaggc ttttaaaact tccacatatt cttgggaatc caaaaggcca 001520
001521 catgtacatg cagggtgagc aaatagagaa gacttgagaa agccttaaac tctcacctct ggctaaccat caggcttgct 001600
001601 caaataggaa gtgaaaacta aggtgaattt gttgcttagc tgaatgttga aggtgtgccc caacacttac acagagccta 001680
001681 ctggtaaaga ctgagagtgt tttctttttg tcttggtttc aggcatttaa ggaaatctgt ttctcttttg gatcactagc 001760
001761 tgcaaattaa gctaacagaa caggagctca gctggtcaca cacagcaacg aatacagact ttataaagtt cagaaaagtt 001840
001841 accaaacagt ggtaaccata acaagtacca acaatgaact atggggaggg aggagaatct gatttccaga gttaccacat 001920
001921 tataatacta ttcaaaatgt cacattttta gcaaagatta catgacaagg aaaaaccaga aaagtatggc ccatacacag 002000
002001 gtaaaaaaag aaattaatag aaactacccc tgaagaagca cagacttcgg atgtacaaaa caaagacttt tcatcaactc 002080
002081 ttttagatat gctagaagag ctaaaggaaa ccatggacag agaacaaaaa aattaggaaa gcaatgtctc atccaataca 002160
002161 gaatatcaat aaagagattg aaattgtaga aaagaaccaa atagaaattc tggagttgaa aagtattata actaaaactg 002240
002241 aaaattcact agaggtattc agcagcagac tggagaagtc agaagaaaga atcaacaggc ttcaagatag gtcaattaag 002320
002321 attatacagt ctgaggagca gaaaggaaaa agaatgaaga aaaatgaaca gagcataaaa gacctctggg actctatcaa 002400
002401 gcataccagt atatgcatga ggggagtccc agaaggagaa gaaagagaga aagggacata atatttgaag aaataatggt 002480
002481 agaaaatgtc ccagctttga tgaaatacat gaatctagat attcaagagg ctcaaagaac cctaaatagg gtaaactcaa 002560
002561 aaagacccac aCCGGaatgc aaaagtgagc tgggtgtggt ggcacgtgcc tgtggtccca gctactcgag aggctaaggc 002640
002641 aggaaaatcg cttgaaccca ggaggcagag attgcggtga gccgggattg cgccagtgca ctccagctgg gcgacagagc 002720
002721 gagattccat ctcgaaaaaa aaaaaaaaaa aaaaaaaaaa CTATTGCTGC AGTCATTCAG ATGGAAATGG GGAAAGAATA 002800
002801 ATATTAACTG ATTTCAAAAA GGACTTGAAG ATGTGAATCA TCTATTTTGC TGAAGAAATC TTAACTCTTT GAAATTACTT 002880
002881 TTTGTTGCTG TTGTCATACT CTTAGGTGCC AAACTGCGGT AAATTTTTTA TCAGTGAAGT GGAAGCATGT GTTTTGTTGT 002960
002961 TTTGGGAATT TTTATCAAGT ATCTTCAGAG AAGATTATTT CCTGCTTTAT CTTCAAAAAC TGGAAAGGAA GGGTCAAAGA 003040
003041 AAAGACAGTA GCTggccggt catggtggct catgcctgta atcccaacac tttgggaggc tgaggtgggc agatcacctg 003120
003121 aggttgggag ttcgaggcca gcctgaccaa cgtggagaaa tgccatctct actaaagatg caaggattgg ccgggcgtgg 003200
003201 tggtgcgtgc ctgtgatccc agctgctcag gaggctgagg caggagaatc gcttggacct gggaggtgga ggttgcggtg 003280
003281 agctgagatc acgccattgc actccagcct gggcaacaag cgaaactctg tctcaaaaaa aaagaaaaGA CAGTAGCTTA 003360
003361 TGTTCATGTC AAGCACCTCT CATCACAGTC TAGTTCCAAG GAAAAAATTC CCAGCGTTTT CTACATTCGG TGCTGCGTCA 003440
003441 TCTGAAATCG GCACATTCCA TGGAGGAAGG AGTCCT
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Predicted Small Protein

Name NONHSAT011933_smProtein_935:1141
Length 69
Molecular weight 7931.1652
Aromaticity 0.205882352941
Instability index 63.7529411765
Isoelectric point 10.125793457
Runs 9
Runs residual 0.00814785373609
Runs probability 0.0120316394826
Amino acid sequence MALFSFLLSFFFLRWSFARVAQAGVQWRNLGSQQPPPPGFKRFSCLNLPSSWDYRHLPPC
LTNFCIFS
Secondary structure LHHHHHHHHHHHHHHHHHHHHHHLLHHHHLLLLLLLLLLLLEEEELLLLLLLLLLLLLLL
LLLEEEEL
PRMN HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLL
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