NONHSAT011826
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011826 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1186 nt |
Genomic location |
chr10+:26823287..26824417 |
Exon number |
1 |
Exons |
26823287..26824417 |
Genome context |
|
Sequence |
000001 GTGCCAGATC TCAAATCACA AATGGTCATG CTAGAACTGC CCAGGTTGTA TTTCCCTGAG ACAATCCATG GACCTTTTCC 000080
000081 TGAGTTAGTA AATTTCCTGA GTTAGTAAAT TTTGGACCTC CCTTGAAAAA TCAGAAGACC TGGTGATGCC CTCGGCATCC 000160 000161 GGTTCCCACC TGGAGCCAAT TGGCTCATGC TGGAGCCAAT TAGCTCATGC TGAAGAGCGC CCTCTCTCGT TCATTAAGGT 000240 000241 TCCGCCCAGG CCTTGCGCAT GTCTGTTCCC TGCCTGCTTT TCACAGCCCG GTGCCAAATA AAGCAGCTAC CAGAACCAGC 000320 000321 TGCCACCCCC CAGATGCTGA GCTCAGGTGT TGCAGGTTCT GGTGCCTGGG AGCATGAGCA CAGTGAGCAT TTCCCAGGGA 000400 000401 GGCCCAACAG GATAGTCCTT GTTCCAGGAA TTCAGCGATG TTTTACAGCT GGATGTAAAA GAAAATTCAA AGCATGCTAT 000480 000481 GCTATGAACA ATCGTTATCC TGCTGTCTAA TTGGGGTCAA AACTCTGAAT TTAAGAGATT ATTAACAGGA TGACTAATAC 000560 000561 TAGCCAAATT TGGGGAGAAA TTGGGGAGTG TAAACAGAAA TATTTTCCAG CTCTACTACA TAAAAATGTA CTTGGAGGAT 000640 000641 GCAAAATCCA GTTTGTTTTG CATTTATGGA ACTAAATGAG AGGATGTTGA GAGTTATAAA AAGAAAGCAA AAAATAAGTT 000720 000721 TGACTATTTG AATTGTAAAA TAGAATAATA TATAATTTTA TTCTATTGAT TTTTAAAACA AAATTTATTA AGAATTCTAT 000800 000801 AATCCTATGC AAGTTTTGAG ATTTAAAAAT CTACAACTAG AAGATGTGCT TTGTTATTCT TTTCTAATAC TGATGTATTT 000880 000881 ATAACTGCCT TCTTCCTTCT TTGAAAAGAA AACTATCCCA ATAATAAAAT ATTAACTTAT TTATTTTTAT CCTTTTTATT 000960 000961 TTTACTTTTT GTGGGTACAT AGTATGTATA CATTTATAGG GTACATGATA TATTTTGATA TGGGCATGCA ATGTGACCTA 001040 001041 GTCGCATCAG GGAGAATTGG GTATCCATCC TCTCAAGCAT TTGTCCTTTG TATTACAAAC AATCCAATTA CACTCTTTTA 001120 001121 GTTATTTTTA ATTTGAGAAG GAAATAAAAT CAGCTGGAAC TGAAAAAAAA AAAAAAAAAC AAAAAC |
Predicted Small Protein
Name | NONHSAT011826_smProtein_206:376 |
Length | 57 |
Molecular weight | 6165.2137 |
Aromaticity | 0.0714285714286 |
Instability index | 69.3696428571 |
Isoelectric point | 9.75140380859 |
Runs | 8 |
Runs residual | 0.0104410616706 |
Runs probability | 0.0252163928634 |
Amino acid sequence | MLKSALSRSLRFRPGLAHVCSLPAFHSPVPNKAATRTSCHPPDAELRCCRFWCLGA |
Secondary structure | LHHHHHHHHLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLHHHHEEEEEELLL |
PRMN | - |
PiMo | - |