NONHSAT011713
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011713 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
744 nt |
Genomic location |
chr10+:21823419..21901380 |
Exon number |
7 |
Exons |
21823419..21823449,21823574..21823733,21827762..21827841,21846550..21846753,21875223..21875277,21884260..21884369,21901277..21901380 |
Genome context |
|
Sequence |
000001 GGAACGTGAG TGACTGAGCG GCAAAGCCCG AATGGTCTCT AGCGACCGGC CCGTGTCACT GGAGGACGAG GTCTCCCATA 000080
000081 GTATGAAGGA GATGATTGGA GGCTGTTGCG TTTGCTCAGA CGAGAGAGGC TGGGCCGAGA ACCCGCTGGT TTATTGCGAC 000160 000161 GGGCACGGCT GCAGCGTCGC GGTGCATCAA GCTTGCTATG GCATTGTTCA AGTACCCACT GGACCGTGGT TTTGCAGGAA 000240 000241 ATGTGAATCT CAGGAGAGAG CAGCCAGAGT Gactctactt catgaggctg gaaccatgac tgctggcagc tcttgtttcc 000320 000321 agcccctttt accagaagaa ggggctctct agaagaatcc tggaaaggac tctgattggc ctgtcttgga tcatgtgccc 000400 000401 atcatctctg tggctggagt ggggagggta ctgtgaatgg caaccctcac tagaactaca tagttggagt cagggAGATG 000480 000481 TGAACTTTGT CCCCATAAGG ATGGAGCTTT AAAAAGAACA GATAATGGGG GTTGGGCCCA TGTGGTTTGT GCCCTGTATA 000560 000561 TTCCAGAGGT ACAATTTGCC AATGTTTCCA CAATGGAACC AATTGTTTTA CAGTCTGTTC CGCATGATCG TTATAATAAG 000640 000641 ACTTGCTACA TTTGTGATGA ACAAGGAAGA GAAAGCAAAG CAGCCACTGG TGCTTGCATG ACATGTAATA AACATGGATG 000720 000721 TCGACAGGCT TTCCATGTAA CATG |
Predicted Small Protein
Name | NONHSAT011713_smProtein_524:700 |
Length | 59 |
Molecular weight | 6953.3983 |
Aromaticity | 0.172413793103 |
Instability index | 40.6587931034 |
Isoelectric point | 9.86016845703 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0356827415651 |
Amino acid sequence | MGVGPMWFVPCIFQRYNLPMFPQWNQLFYSLFRMIVIIRLATFVMNKEEKAKQPLVLA |
Secondary structure | LLLLLLLEELLHHHLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii |