NONHSAT011556

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT011556

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4270 nt

Genomic location

chr10-:14916396..14920665

Exon number

1

Exons

14916396..14920665

Genome context

Sequence
000001 GGCGAGCGCG CGTGCTCCCG GATCCTCGGC AGTGTCCGGC GCCCCCTTCC CTTCGCCAGG CCCGTTTGGC GCCTTCACTC 000080
000081 GGGAAGACGT CGGCCAGGAC TTTGCGCTTT GGAGACGTCT TACTTCGGCA GCACTCGCAC ACTGCGAGAT CCGACACGGG 000160
000161 CAGCGGGGAC CTAGGGAGCC GGGGACGCTG CCTGTCGGGT ACGGTTCCGC AGCTACCGCA GCCCCGTGGG CCATGGTTAG 000240
000241 TCTCCCCCCG ACACCGCTCC CTCTAGAGCT CCGGGCTTCG GAAGCGGCTG CACGTGGGCA TGGCTGGAGA GGTTCCGCTG 000320
000321 GCTTGGGGCA GTCGCCGGGA TTCCGACTGG TTGGTGTGGG GTGTGGCCTG TGCTATCCAG CTCCCAGCTG ATCCTAATGT 000400
000401 GCGGCACAGC GGAAACCACC GGTCCACATC AGTGCTTCTC ACTTAAAGGG GCTTACGAAT CGTCGGGGGT GGGGGAGCTG 000480
000481 GACTTGGAAt tttttaagag atgaggtctc actctgtcac ccaggctgga gtgcagtggc gcgattacgg ctcactgcag 000560
000561 actagacctc ctgggctcaa CTTTAATGTA AATTGGGATT GGGTAGGTCT GTAAGGGGAC CCGAGCTCCC CTCCCATGTT 000640
000641 GTTGCCAAGC TCCTGAGCTC GGCCTGGTGG CGGGTGGGGG CCGGGAGGAG AAGGACACGT TAGTAAGGAA GCTGCAGGAC 000720
000721 GACTCCAGGG GCCTCCCACC TGGTCTCCAC CCCCCTCCCC CACCCATTCT TGACGCTGCA TCCATGATTG TTCTAAACAA 000800
000801 CCTAAAGCAG AAATCTTAGA GCAAATAACG AAAACTGGCA GAAGGCCATT TGATATCTCC TTAAAAAATT CATGTAAAAA 000880
000881 ATTACATAAA CGTTTCAAAG CAGTATGTAT AAATTTGAAA TACTGGAAAT GAACGCAGAC CATTAAAGGA ATAGTTAATT 000960
000961 ATTTGATTCC ATTATGAAAT ACTGTCTAGC CGTCTTAAAA AGGTGTTCAT GAAGCTTTTA GTATTCAGCA AAACCAAAAC 001040
001041 AAATCCCCCT GAAATATAGT TTTAACTATG GAAGAAAAAA ATGTATAGGA AAATAACGAA ATAGCCTTTT CGGAGTGATT 001120
001121 TTCTTTTTAA CTTCTCGTTT TTAAATATTT AATCATTTTC TACGATGGGA AACACCACTT CCTCACACAC ACTCATGCTC 001200
001201 CCAGACTTTA TTTAGCTACA AACGGCATCA TAATACAAAT ACTGTTCTGC AGTCCGTGTG TGTTTCAATG CAACTGCATT 001280
001281 TCTCAGACAT GTTTCTAAGA TTTGAGTCCT TAGTAAATTT TGTATTCCAT ATCTCATTAC CTTGAGATAA GGAATAAAAG 001360
001361 GCCCTGTCCA ACCCTGTCAC CTGGAAGAGC ATCCAGGCCC TTTAAGGCTT AGTCTATCTA GGATTATGCC TTCAGACTTG 001440
001441 GATACAGCCT CCCGTCCTAA CCGGCCCCTG TATTCATTAC CTCTCCTGTA TGTTTTCAGA GCCCACCAAG GAGCGGCCAT 001520
001521 CGCTActcac tggccactct tgaatccttt ttggctcctt ttcctcagtc caacctgggt tcctcagaga agagactgta 001600
001601 gtcctgggac tgcatttctt ttccgccctc tccctatgtg actgccccaa ttcccatgga tttaaatagc atcttgacac 001680
001681 acaagatgcc tcacttatcg tctccggccc tggcctctgc ctgaattcca ggctagaata tccacagtgc gtaatggaca 001760
001761 tatgccctta ggtgttgcac aaacatctca aattgaacat atccggaaaa atacacttct gaacttcGTA Gcattcagaa 001840
001841 taaaactcaa acctccagat ggccggcagg gcctccagtg atgggaatcc tgtctcacct cacttggtgc cactctcccc 001920
001921 tttactcatt ttcctggcct ttccccggcc ccacttaccc agaaatcttt tactgtgcat ctcctatgtg ccaggcacct 002000
002001 gataggtgct gggaatatag cagtggatga gaaagaaaaa agacccagtc ctcatggagc tgacttccta gtgacaggag 002080
002081 cagcggataa agcaaatCAC TGAAGGCAGC TGGAAATTAC TTTCCGGTTA AGAGGACAGG CTCCTTCCCC TCCTCACATG 002160
002161 GCTACCTTCA GATCACTTGG GTCTCAGCTT AAACACCACC TATTGACAGA GGCCTCGCAT GTTACCTCAT TCTTTAGCCC 002240
002241 TACTTTGCAT CCTTAAAAAG CACTCATCAA AATTTGCAAT TATCTTGTCG GGTTTTTGTT CTTTGGTCTT GATTCATAAT 002320
002321 GAATGCATCG CACTATTTTG TAAATCCAGT GTTTCGTTTC GTGTCTTGAA TCCCATCCAT TCCAGCGCAT AGATGAGGCC 002400
002401 CTGTCTGTTC AACATTCATC ACCGTGTTTA CTATCTAGAG cagcaattct caaagtatgg taattgggac ccgaagactc 002480
002481 ttcacagggt tcatgagcgc aaaactattt tcagaccaac atgttctctg ccttccttcg ctcatgagta catagtggaa 002560
002561 ttttctagag gttacacaat ttgaatattg caacacattg aacgaagacg caggtaccag aacatagcta tctcctatta 002640
002641 agccagacat taaagagatt tgaaaaaata caaaatactg cttttggcta ggcaaagtgg ctcgcacgta taatcttggc 002720
002721 actttgggag gctgaggaat tgctagagac cagccagggc aaccctacta aaaaattagc tgggcgtggt ggcacatgcc 002800
002801 tggggtccca gctactcagg aagctgaggt gggaggatcg cttgagccca ggagtttgag ggtgtagtga gctatgatca 002880
002881 aaccactaca ttgcagcctg ggcaacagag caagaccctg tctcaagaca aaaaacaaaa aataaaaccc cagataccac 002960
002961 ccttgccact aattttttgt cttagaaaaa ttatttctca taaaaaatta actttattac ttagaaataa tttttaaaat 003040
003041 tggttttaat ttccatatgg taactatagt tatataacta cattttatgt atatgtaaca aacaaaagct ctatgggttc 003120
003121 tcaacatgtt attttttaag actataaagg gttcctggga ctaaaatgtt tgagGGTGTT GGTAAATCCT GGCTATAAAT 003200
003201 GGAGAGAGAA ATAAAAAGCC ACTGAGAGAC ACACACCAGG GTCCTCAAGG GAAAAGTAGA GAATCATGAC CCTTTCCCAG 003280
003281 TATTTTTTTC ACAAAGACCA CATGATTTCT GGAGTGTCTC CTCTTCTACT GAAATAAACG TTCTCTTCTG AGAGGCAAAG 003360
003361 AATCATAGAA TGAACACTAG ATTAAGAAtg tgaatttaaa tgaaataatc catgtaatgt gcttaaaata gtAAGCAGTC 003440
003441 AAGAAAAATT AAGTTTACAA AATAAGCatc tgaatgttag ttcaaaatcc accatttatt cactgtgaga ccttggatac 003520
003521 tttatttaac tgctgtgaat ctattatctg gaaaacagaa ataaccaagg ccatattact ctctacatag tacaactact 003600
003601 cgtggaattg tgatgagatc aaaattttaa aatgagataa tgaattaaag caaataacaG TATTATATGG TCACTCATTA 003680
003681 TCATTTTAGA TATTGTGATT TTTCCCATAG AACTTTTATG CTAGGATACT TTTAAGAATT CTTATACATA TAAAAGCTTT 003760
003761 CAGTTTGTGA TGAATATTTT GTGACCTCCt gttaaggact gaacgttttc atctctgaaa aattccagtg ttgaaatcct 003840
003841 cgcccccaaa gtgattatat tgggaggtgg ggcctttggg aggtgattaa atcatgaagg tggaggctgc atgcatggga 003920
003921 ttgacaccct tacaagaggg acccttcaga gctctctcgc cctctatcct ccgtgtgagg ttataaggat agctggcaac 004000
004001 ccaaaaggga gccctcatca gaacccggcc ccgcttccag cctggtccag cacccgaact gacttccagc ctccagaact 004080
004081 atgatacatt tctgatgttt acaagccacc ccccagacta tggtacttta ttatagcagt ccaaactaag acaCGTTCCA 004160
004161 AGACTTTCAC ATCATAGGTA TTTCTTCCTA TTTTTATATT TGGCTCTGTT CTTCAGACAA TGTCAGATGT AAATAGGCAA 004240
004241 AACTATAATT TGACATAAGC TTTTAGTGGT
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Predicted Small Protein

Name NONHSAT011556_smProtein_1880:2029
Length 50
Molecular weight 5648.3847
Aromaticity 0.204081632653
Instability index 64.5634693878
Isoelectric point 5.26483154297
Runs 7
Runs residual 0.019194704909
Runs probability 0.0225729931613
Amino acid sequence MGILSHLTWCHSPLYSFSWPFPGPTYPEIFYCASPMCQAPDRCWEYSSG
Secondary structure LLHHHHLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLEEELLL
PRMN -
PiMo -