NONHSAT011063
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT011063 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
590 nt |
Genomic location |
chr10+:3966711..3968004 |
Exon number |
2 |
Exons |
3966711..3967166,3967871..3968004 |
Genome context |
|
Sequence |
000001 ATGGAGTGTG GTGACCACAG AAAGAATTGA TGGAAGCATG TGAGGAAATG TGTCAACCGG AAAAGCAGCA GCTCAGCTCC 000080
000081 TGGGGCCCAG TGTGGACTTG CCTTCAGGAG GTGATGATGT CGCTTTTGAC CTGTGGGTCA GAGTAAAAAT TGTGTAAAAT 000160 000161 CAGTTCCCAG TGTACAAACT GATGGATGTT AAAGGTTAAT TTGTAAATAA CTTTATATTT CTATGGGGAA AAAGCTTCCT 000240 000241 AAGTTCCATG TAGGTTCTTG GGCCACTGTT TATGATAGAA TTATAATACC AGATACTCAA AATGTCAAAT GTCAGACAAA 000320 000321 AATATTATGA ATATACAGAA TATACAGTAT TTTCTTCTTC TTCTTCTTTT TTTTTTTTTT TGGATACAGA GTCTTGCTCT 000400 000401 GTCATCCAGG TTGGAGTGCA GTGGCATGAT CTCAGTTCAC TGCAACCTCC ACCTCTGCAG AAAGAGGAAA AGACATCTTT 000480 000481 TGAGGAAGCA AGCAAAAAAT AATTCTGAAT TAGTTTATAC TGGTCCAGAG GTTTGTTTTA GTGCCAGCAA TGGAGATATC 000560 000561 AGTAAAAACT GAATCCTAAT TATAATAATA |
Predicted Small Protein
Name | NONHSAT011063_smProtein_308:571 |
Length | 88 |
Molecular weight | 10124.7757 |
Aromaticity | 0.103448275862 |
Instability index | 57.0781609195 |
Isoelectric point | 9.50531005859 |
Runs | 11 |
Runs residual | 0.0118226600985 |
Runs probability | 0.0361083008142 |
Amino acid sequence | MSDKNIMNIQNIQYFLLLLLFFFFWIQSLALSSRLECSGMISVHCNLHLCRKRKRHLLRK QAKNNSELVYTGPEVCFSASNGDISKN |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLLHHHHHHHHHHHHH HHHLLLEEEELLLEEEEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiii |