NONHSAT010825
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010825 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
658 nt |
Genomic location |
chr1-:249110229..249111045 |
Exon number |
2 |
Exons |
249110229..249110861,249111021..249111045 |
Genome context |
|
Sequence |
000001 CAACCAGGTG GAACTACAGC TGGATGAGGC CAGGACCACC TATCGGAGGA TCCTACAGGA GTCGGCGAGG AAACTGAATA 000080
000081 CACAGGGTTC CCACTTGGGG AGCTGCATCG AGAAAGCCCG GCCCTACTAT GAGGCTCGGC GGCTGGCTAA GGAGGTATGG 000160 000161 CTGGCTGACC ACGTTTGAGG AAGGCTACGT GCTGAGCCTG GCCCTGGATT CTTCTGTCTC TATATGGAGt gagagacaaa 000240 000241 acaccagacc ctgagggcag agccctgggc tagacctggc tggtcggaac cagctctgtg ggctcaggag gttcctttac 000320 000321 cacgtgggct ctgggcttat ggtctataaa atggtgaggg tggCTGTGGG AGAATATTTA GTTCAGCCCT GCTAATGTTT 000400 000401 AAGTGCCTTC TGTGTATCAG GAATCAGGCT TTAGGGTATA TCAGATATGT CAGTTCTAAC ATCCTGTTGT TTTCATCTGC 000480 000481 GCCCATTTCC TCTTCCCTTT GGTTCATGTC TCTCTTCTGA ATCTTTTCTT TGCTTACTCC TCACTCTTTT CCCCATCCCA 000560 000561 CACCCCtttt ttctgtaaca aattactttt aacaaataat atgtgttcac cattggaaaa acataataaa acaagaagga 000640 000641 aacaaaaatc acccaaaa |
Predicted Small Protein
Name | NONHSAT010825_smProtein_446:577 |
Length | 44 |
Molecular weight | 4859.8565 |
Aromaticity | 0.162790697674 |
Instability index | 92.0372093023 |
Isoelectric point | 6.67706298828 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0459282812223 |
Amino acid sequence | MSVLTSCCFHLRPFPLPFGSCLSSESFLCLLLTLFPIPHPFFL |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTToooo |