NONHSAT010643
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010643 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
762 nt |
Genomic location |
chr1+:244624722..244715767 |
Exon number |
10 |
Exons |
244624722..244624817,244627210..244627258,244640843..244640916,244641208..244641277,244643019..244643086,244653749..244653773,244662304..244662381,244678579..244678629,244681894..244682000,244715624..244715767 |
Genome context |
|
Sequence |
000001 AGCAGGCGCC ATGTCAGCCC GGGAAGTGGC CGTGCTGCTG CTGTGGCTGA GCTGCTATGG CTCCGCCCTT TGGAGGTAGA 000080
000081 GAGACGCCAG TCGCAGGTAT TCCACTAACA GCCCAAACTA TCGCATTTTT AGTACCAGAA GTACTATTAA GTTAGAGTAT 000160 000161 GAAGGAACAT TATTTACTGA GTGGAGTGTG CCAGAAACTT GTTTTGTGCT AAATAAAAGC TCACCCACGA CAGAATTGCG 000240 000241 TTGTTCCTCA CCTGGTGTTC ACGCTATAAA ACCAATTGTT ACTGGCCCAG ATGAAGAAGA ACGCTATTTA TTTGTGGAAA 000320 000321 GTTCTCATAC TTGCTTTCTG TGGTACTATA GAGTTAGACA TTTCTTTAAC AACTTTACCC AGCTTATCAC TGTGTGGGCA 000400 000401 TATGATCCAG AAAGTGCAGA TCCTGATGAG TTGCTGGGGA ATGCAGAAGA ACCTTCAATA aattccctGA TCACAGCTGT 000480 000481 CTCATGAAAG ATACATACTC TCCTCTGGAT GAATTCCATA GTACTCAGCA CACAGATGGC CACATTGGGA CAGAAGCCTG 000560 000561 TCATACATAC AGTTCTGAAG AGAAAAGTTT ATTCTTCAAA TGAGAAAATG AGAAGGGGGA CCTGGCGTAT TGTAGTACCA 000640 000641 ATGACAAAAG ATGATGCACT AAAGGAGATT AGAGGAAACC AAGTTACTTT TCAGGATTGC TTTATTGCAG ATTTTCTTAT 000720 000721 TCTGTTGACT TTTCCTTTGT TGACCATACC TGAAATTCCT GG |
Predicted Small Protein
Name | NONHSAT010643_smProtein_290:460 |
Length | 57 |
Molecular weight | 6368.7484 |
Aromaticity | 0.0714285714286 |
Instability index | 51.625 |
Isoelectric point | 8.98797607422 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0224341989048 |
Amino acid sequence | MKKNAIYLWKVLILAFCGTIELDISLTTLPSLSLCGHMIQKVQILMSCWGMQKNLQ |
Secondary structure | LLLHHHHHHHHHHHHHLLLEEEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTiiiii |