NONHSAT010364
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT010364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1794 nt |
Genomic location |
chr1-:235701352..235703145 |
Exon number |
1 |
Exons |
235701352..235703145 |
Genome context |
|
Sequence |
000001 GCAACAAACA TGTATTCTTC CACTGCTATA ACATCCCTAA TCCCCTTAAT CTTACCGATT ACCATTACCT TAGCCAACCC 000080
000081 CCGCAAAAGT TTCACACCCA AATTACGTAA AAACATCTAT CGCATGTGCC TTCGTTATTA GCCTCATTCC TACAACAATG 000160 000161 TTGATATGCA CAGACCAAGA AGTCATTATC TCAAACTGAC ACTGAATGAC CGTCCAAACT CTCAAACTCT CACTAAGCTT 000240 000241 CAAGCTAGAC TAATTCTCCA CAATATTTAT CCCAGTAACA CTCACTGTTC ATTACCTGAT CTATTATAGA ATTCTCAATA 000320 000321 TGATATATAA ACTCAGACCC TAACATTAAT CAATTGTTCA AATACTTATT TTCCTCATCA CAATATTAAT TCTGGTTACC 000400 000401 GCCAACAACC TCTTTCAGCT CTTCATTGGA TGAGAAGGCG TAGGAATCAT GTCTTTCTTA CTAATCGGCT GATGGTACGG 000480 000481 CCGAGCAGAT GCTAATACAG CAGCCAAGCA GTTCTGTACA ACCGCATCGG CAATATTGGC TTTATTTCAG CTATAGCATG 000560 000561 ATTCCTCCTG TCCTCCAACA CATGAGAATA TCAGCAAAAA ATAAATTCTA GACCCTACCC CCAACTCCCT CCCATTAATT 000640 000641 AGCCTTCTCT TAGCAGCAGC AGGAAAGTCA GCTCAATTCG GCCTCCATCC CTGACTCCCA TCTGCCATAG AAGGCCCAGC 000720 000721 CCCAGTCTCA GCCCTACTCC ACTCCAGCAC TATAGTTGTA GCAGGAGTGT TCCTGCTCAT CTGCTTCTAC CCTTTAATAG 000800 000801 AAAATAACCT ATCAATCCAA ACCTTTACAT TATGTCTGGG GGCTATTACT ACCTTATTCA CAGCCACCTG TGCTGTAACA 000880 000881 CAAAATGATA TCAAAAATAT CATAGCATTC TCCACCTCAA GCCAGTTAGG CCTTATAATA GTCACAATTG GCATTAATCA 000960 000961 GCTGCATCTA GCATTCCTTC ACATCTGCAC CCATGCCTTT TTCAAAACTA TATTATTTAT ATGTTCAGCG TCCCTCATCC 001040 001041 ATAACCTCAG TGAAGAACAA GACATCCGAA AAATAGGAGG GCTATTCAAG ACTCTACCCC TCACTTCCTC CTCCCATTTT 001120 001121 ATCAGCAGCC TCACAACTTA CAGGTATGCC TTCCTCACAG GCTTTTACTC CAAAGACCTC ATTATTGAAC CTGCAAACAC 001200 001201 ATCATACACC AATGCCTGAG CCCTTTCTAT TACGCTTATT GCCACCTCCT TGACAGCTGT CTACAGTACC CATATTATTT 001280 001281 TCTTCGCTCT AATAGGGCAA CCTTACTTCA TGACTCTGGT TATTATTAAC GAAAATAACC CCTTCCTAAT TAAACACCTA 001360 001361 ACAATCAGCA GCATCTTCGC CGGATTCCTC CTCACCAACA GTATTATTCC TGCGTCATCC CCCCAAACAA CCATACCACT 001440 001441 CCACCTGAAG CTCACAGCCC TAGGTGTGAC CACCTTAGGC TTCTTACTAG CAATGGAGTT TAATCTCATA ACTAATAACC 001520 001521 TTAAACTAAA ATACCCACTA CAGACATTCA ACTTCTCCAA AATACTAGGA TTCTATTCAG TCACAATTCA CCATACAACC 001600 001601 CCCAACTCAA ACCTATCCAC AAGCCAAAAT CTGGCTTCAC TACTACTAGA CCTAATTTGA CTAGAAAAGT CTATACCAAA 001680 001681 GACCATTTCA CAAACCCAAA TTTCAGCCTC CATTACTGTG TCTACTCAAA AAGGCCTAAT TAAACTCTAC TTTCTCTCTT 001760 001761 TTTTTATCCC ATCCCTTTTA ACCCTACTCC TAAT |
Predicted Small Protein
Name | NONHSAT010364_smProtein_488:610 |
Length | 41 |
Molecular weight | 4838.6337 |
Aromaticity | 0.15 |
Instability index | 63.1575 |
Isoelectric point | 10.1659545898 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.042710778005 |
Amino acid sequence | MLIQQPSSSVQPHRQYWLYFSYSMIPPVLQHMRISAKNKF |
Secondary structure | LEELLLLLLLLLLLLEEEEEELLLLLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |