NONHSAT009851
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009851 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1322 nt |
Genomic location |
chr1+:225965515..225978160 |
Exon number |
2 |
Exons |
225965515..225965636,225976961..225978160 |
Genome context |
|
Sequence |
000001 GGTGCGAGGA GGCGCCGCCA TCTTGGGGCT GCTGGGACTC GCGTCGGTTG GCGACTCCCG GACGTAGGTA GTTTGTTGGG 000080
000081 CCGGGTTCTG AGGCCTTGCT TCTCTTTACT TTTCCACTCT AGACCAAGCT CAAGATGTAA AGAAGATTGA GAAATTCCAC 000160 000161 AGTCAACTAA TGCGACTTAT GGTAGCCAAG GAAGCCCGCA ATGTTACCAT GGAAACTGAG TGAATGGTTT GAAATGAAGA 000240 000241 CTTTGTCGTG TACTTAGGAA GTAAATATCT TTTGAATTAG AGAAAGTGTT GGGACAGAAA GTACTTTATG TAACTAAGTG 000320 000321 GGCTGTTCAG AAGCTTAGAG GTCATTTTTT GTAATTTTCT TTTTAATTAC TTTAGAGAGC TAGGGATGCA AATGTTTTCA 000400 000401 GTTAGAAAGC CTTTATTTAC TTTTGGAAAT TGAACAAGAA ATGCATCTGT CTTAGAAACT GGAGATTATT TGATGTTAGG 000480 000481 TAAAACATGT AATTGTTTCT CTGGCAAATT TGTATCAGTA ATTTGAAAAT GAGATATTAG GAAAAACCAA TTCTTCTTAA 000560 000561 ATTTAGTTCA TCTTTCTTTA AAAGAACATT AAATGTAACC ATTTTGTCAG ATCCATGTAT TTTGGAGCAT AAAATGTATG 000640 000641 CTGTTGTGAC CAATAAATAT AAAATATGGT AATTGGAATT AACTCCACAC CATAGTATGC ATTGTTATAC ATACTGTGTA 000720 000721 CCTAATTATG TATAGCAGTG TAGTCTCAAT TATATCTGAA AGTAATTGTG ACTAACAAGT ATGCTTTGCC TTATTTCCAC 000800 000801 ATTTAAACTA CCTGTTAATA TAAGGGATTT GTAGTATCAG CTTGTTGAGC AATGACTTTG AATCTAGTTT TCAGTGATCA 000880 000881 GAAGCAGCAG TTATTTGAGT GTATGAATGG AATGATGATC ACTGTGCTAT AATGTACTGA AACCACCATA TTACAGAAAT 000960 000961 ATTTACTACA TATTTTCCAT CTGTAGTTTC TCAGAAGGGC TATGGATTAG TTTGAACTGT CAAATCCTTG CATACTTCTG 001040 001041 TGACACCCCT GCCCATTTTC TGTCTTTAAT TAACCAAGGT GTTAGGTGTG ACTGTCACAA CTGTTATGTT TTCCAGTAAA 001120 001121 CTAGAAGTAC GATATTTGAT AATTATATTT GTATTTCACC ACCTAAATGT AATGTTGATT CCTCAAGAAT GAAATGAAGG 001200 001201 CACTACATTG AAATATGTTT TGTATAAATT TGTCATGTTG AACAGCATTT TAGCATGGTA AGTTCCCTTA GCTATATGAA 001280 001281 TTTTGGCATG TTTCAGAGAG ATCAGtaaat aaaatattag at |
Predicted Small Protein
Name | NONHSAT009851_smProtein_851:931 |
Length | 27 |
Molecular weight | 3035.6427 |
Aromaticity | 0.0769230769231 |
Instability index | 47.5576923077 |
Isoelectric point | 4.36907958984 |
Runs | 6 |
Runs residual | 0.0214669051878 |
Runs probability | 0.0249808632162 |
Amino acid sequence | MTLNLVFSDQKQQLFECMNGMMITVL |
Secondary structure | LEEEEELLHHHHHHHHHHHHHHHEEL |
PRMN | - |
PiMo | - |