NONHSAT009815
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT009815 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
823 nt |
Genomic location |
chr1+:224753067..224776257 |
Exon number |
4 |
Exons |
224753067..224753524,224753901..224753966,224770866..224770969,224776063..224776257 |
Genome context |
|
Sequence |
000001 TAGATGAGCT GTATGAGTCA GGAGTTCTGC TCTCCAGGTC TGAGGCTGTT CATTGCCTGG GTTTGTCCAG CGGGCCTGAA 000080
000081 GCCATGGAGA GCATAATATT TAGAGGTGGC GAACCCGACa ccaccctgct tgcattcttt gctccaggcc ttctgaccta 000160 000161 gttgtccttt tcctgtaccc catgcttgct ccctgagccc tacgcttgct gttctccaga ttgaggcttt ctcctcttgc 000240 000241 ttcatactcc cctccctcag cccactatgc actatgtcag gccaactggt cttactctgc aggagagtct gagattcact 000320 000321 gttgcttcct gtggggaggc ttttctgagc ccccaggcct ggtgctgtgt gctcccgtgg cagcccctgc ttctcctgta 000400 000401 caccacatat tgccaacttg cttctgactt tcccctactg agctacattc tccatgagTT GCCTCCTGGT TATAAAGCAA 000480 000481 AGCCAAACTG GAGAGACCAG TGCCAGAGCC TTTATTACTA AAAGGCACAT GCAAAGTGCT GTAAGATTTC ACAGGATGGA 000560 000561 GAGAACATCT GTGGCAGTGG ACAGAGTCGT GAGTGACCAC AGAAGGCTTT CTGGAGGCAG GACTTGAGGG CCTTTGCCTC 000640 000641 AGACATGCAT ACGGCAGGAG TGTGAGATCT ATGGAGTGGG CTCAGCTCAT GGAGCAAGGA GGACGGCAGG GGCTCCAATG 000720 000721 ATGATGTCTG CGTAAGAATT CCCATTTAAG ATCTTTCCAA GCACAAGAGT CATGGCCCAA TGGCAGAGTG TCCTATGCCC 000800 000801 ACGAATAAAT CAAGGATGAA GAA |
Predicted Small Protein
Name | NONHSAT009815_smProtein_266:520 |
Length | 85 |
Molecular weight | 9746.2271 |
Aromaticity | 0.154761904762 |
Instability index | 55.9523809524 |
Isoelectric point | 6.68304443359 |
Runs | 13 |
Runs residual | 0.0207764634516 |
Runs probability | 0.0437541614012 |
Amino acid sequence | MHYVRPTGLTLQESLRFTVASCGEAFLSPQAWCCVLPWQPLLLLYTTYCQLASDFPLLSY ILHELPPGYKAKPNWRDQCQSLYY |
Secondary structure | LLEELLLLLLHHHHHHHHHHHHHHHLLLLLLEEEELLLLHHHHHHHHHHHHHLLLLHHHH HHHHLLLLLLLLLLHHHHHHHLLL |
PRMN | - |
PiMo | - |