NONHSAT009563

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT009563

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1826 nt

Genomic location

chr1-:219781303..219783128

Exon number

1

Exons

219781303..219783128

Genome context

Sequence
000001 CTCTGCCTCA ACAGGAAAGC CCCCACTCTC TGTGGAGGAT GATTTTGAGA AACTAACATG GGAGATTTCA GGAGGCAAAT 000080
000081 TGGAAGCTGA GATTGACCTG GATCCTGGGA AAGATGAAGA TGACCTTCCG CTTGAGCTAT GAGAAATGAT TGATAGCTGA 000160
000161 AGGTGGTAGT GAGGACACTT TAAAAAAAAA TCGCCAAAAA ACTGGACTTA GTTTCATCTA TTGTAACATT TACCTGAGAT 000240
000241 GATCATTTCT TTAGTCTAGA ATTTGCCCCA AATCAGAAGT ATACCTCTGA ATTATCTGTA TGTGTCCTGG ATTCCTTGGG 000320
000321 GTCAGATTTT TAAAGTTACT TTATAACCAT TTTGTCCATT TGATGCCATT GTTTATCATC TTTTGAGAAA AAAGTTCTGT 000400
000401 CATACCCTTC TCTCCACAAA AAAGAGACTG AGGGGGAGAT CAAGTGAAAG GGTGCAAGCA AACTTAGTGA CTCCTTGAGG 000480
000481 TGTTTGTCAG TTTTGGCTTT TTTCTCCTTT GTTGTATTCT TTATGTATTG TCTTAATGTA CTTAATATTA CCTGAGTTTG 000560
000561 AAATGGATGA AGACAGCTGC TACCATTAAG GGCCAAATTT TATGCTACCA CTAAACAAAA ATACCCACTC AGTCTGTGTT 000640
000641 AAATTGTATG TCTTTTTAAA GGTATTTAGA GATTCAACTA AGCTTTAAAG AGGGCTGAGC AACTCAGGAA GCCTGTAATG 000720
000721 TGGGCATAAC TCTTTGGACC TGATCTTGAT GCTTCTGCTG CTCTGTTGGC CTCTGAAGAG CAATATCTAA TTTATTATTA 000800
000801 CTGTAATTTT TTAAAAGGCT TTAAAGTGCC TCAGGGGTCC CCTGAAACTA ATTTTCTATT TCTGGGATTC CCTGGATTCA 000880
000881 TTATATGAGA TGGTGACATG ATTAGAGGAA TTCTTTTTTA GTATGAAAAT TGTTCCTTTT CTTCTTCAGT ACTTGCCTCC 000960
000961 TTGCTGGCAT TGAATTAACA CAGGGACAAA ATTTGGTTAA TTTTTTATTT CTAATTCTCC CAACAAACCC CTGTTGCCCA 001040
001041 GTATTTATGT GGTGGCCTTT AACCACCTGA GGGAAAAAAT GAGCTTATTC AAGCTGCCAA TATTTATCTA TGGGCTGTAG 001120
001121 CAGTACACTG AATTGTACTG TGCCAGGGAT ATTGAGATGC TCTGGGGGTG TATTGTATAC CTGCCAGTTT TCTTCATTTC 001200
001201 TGAATTGGGT TTTCTCTTCT TGATGTTGGT TTCCTTCATA TCACCTCAAG GTTTAGATTT GTGAAGGAAT AAGCATGATG 001280
001281 GAAATAATAG TCTTGAAAGG AGATATGTTG TATATAATCA GGAGGAAGAG GAAGGCAGGA CTTACTCATT TTGATATTTT 001360
001361 GCTGTAGGTG GCCAGTTTTG TTTCTCATAG GGAAATCTGA CCCACCTGTC ATGTTGGCTC CTAAGGAACT GCTGTTGTAA 001440
001441 GCGGCTCATC AAGAGTTGAA CTTCAAGTAG CCTTGTTGGG AATATGGAAA AGGAAGAAAG CCACAGGACT GCCCATTCAG 001520
001521 TCTTGTTAAG ATTGGGATGA TTCTGCACAA GCAAAAATGA CTCGAAATTT ATGTATCGAC ACACCTCTAC CAATCCATCT 001600
001601 TCAGCTGACT GAATGTTGTA TGATAGCCCT TCTCCAAAGC AGGGGTAGAA TGTTCAGGTT TCACCACGGA TTTTCTACTT 001680
001681 ATTTCGCTTT TGGAATCAGC TTACAGATTC CAGGTCCCTT TTGTATATAT TCTTTATTCT TTTGCTTTTT TAAAAAATAA 001760
001761 ACTTGTATTA GTCAATGTTT CGTGTTCCGC ATTATTTGAA CCATTTGCCC TTACAGAAAG AGAAAT
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Predicted Small Protein

Name NONHSAT009563_smProtein_1556:1759
Length 68
Molecular weight 7856.3521
Aromaticity 0.179104477612
Instability index 48.1835820896
Isoelectric point 9.03924560547
Runs 14
Runs residual 0.0656403844651
Runs probability 0.0163083251318
Amino acid sequence MTRNLCIDTPLPIHLQLTECCMIALLQSRGRMFRFHHGFSTYFAFGISLQIPGPFCIYSL
FFCFFKK
Secondary structure LLLEEELLLLLLLLHHHHHHHHHHHHHHLLLLEEEELLLLHHHEELEEEELLLLEEEEEE
EEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHH
HLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTT
Tiiiiii