NONHSAT009505
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT009505 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
927 nt |
Genomic location |
chr1+:217975060..218040930 |
Exon number |
3 |
Exons |
217975060..217975192,218036116..218036198,218040220..218040930 |
Genome context |
|
Sequence |
000001 GTTTTTGCCA TTTTCTTCAT ACCATAAAAA TGAAAAGTAC ATCCCATCAA TGCATTTATC AAGCAAGTAT GGTCCTATTT 000080
000081 CTTACAAAGA ACAATTCCGA AGTGAAAATC CTAAGAAATG GATCTGTGAC AAGGATTTCC AGACTGTATT ACCATCATTT 000160 000161 GAGCTCTTCT CAAAGTATGG AAAATTATAT TCAAAAGCTG GACAGATTGT ATAAAGAAAA CAGAAGATGA AATGTAAAAC 000240 000241 TGAGATTAAG GTGTGAAGTG AGTGTGAATA GAAGACCCCA CACTGCCTGG AGTCCTGGAT TCTTCCACGT CTGATGAGTG 000320 000321 ACCTTGGATC TCTTAATCTC TCTAGTTTTC TCTCTCTTAG GCGTCAGAAG AAGAAACTGA AGCCATCTGC ATTTTAAAAC 000400 000401 TTAACAGTTC TGAAAGGAAA ACACAGATGA AGATCCTGTA GGAAATATAC TTGCTATGAT TCAATAAACT ATAAAATTTT 000480 000481 GTAGCTCTAG TCATGAATTA ATTATTGTGT GTATGTATTT GAAATCTCTT AGACATATCT TTTCAAACAA ATACTTAAAC 000560 000561 TTGAGTCTGT TACCTCTGAG AATGTCTGTC ACAATCACAG CCCCTGGTGA CCAACAGTGC CATAAATGGT TCCCCTGAAA 000640 000641 TACCCATATT CTGACCCCAT CACCCGGGTC ACAAATGATG ACACCAGTGC TGGGTACCCA AATTAAGGGC GACTAACATG 000720 000721 TAAGTAGGAT GATGAATGGT TTGAAGTGTA AATTGTGTGA AATAGTTCAG CATGAAAGCT CTGCCCTGAG AAATAATGAC 000800 000801 TGATTATACC AGTTAGAAAC CCTTCAGACT GTTGAACTTG AGACACACAG ACACAACAGA CACAGACTAG TGGGTGTGGG 000880 000881 AGCAGAAGCA TAGGCACTCT CAAATAGAGA AGACATTTGC AAGTCTC |
Predicted Small Protein
Name | NONHSAT009505_smProtein_29:229 |
Length | 67 |
Molecular weight | 7896.9793 |
Aromaticity | 0.0909090909091 |
Instability index | 42.3636363636 |
Isoelectric point | 10.0054321289 |
Runs | 12 |
Runs residual | 0.0312103066594 |
Runs probability | 0.032907907908 |
Amino acid sequence | MKSTSHQCIYQASMVLFLTKNNSEVKILRNGSVTRISRLYYHHLSSSQSMENYIQKLDRL YKENRR |
Secondary structure | LLLLLHHHHLHHHEEEEEELLLLEEEEEELLLEEEEEEEEEEELLLHHHHHHHHHHHHHH HHHLLL |
PRMN | - |
PiMo | - |