NONHSAT008667
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008667 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
571 nt |
Genomic location |
chr1+:198884859..198885429 |
Exon number |
1 |
Exons |
198884859..198885429 |
Genome context |
|
Sequence |
000001 TTTATTTCTT TTATGCATAT ATttatgggg aaaagtttct ttccctactc ttgtcttttc atatgtaatg agttccatta 000080
000081 atgtaacact ttaagctctc CTTTTTATTC TACTCCAGAC ATGCATTTAA ATGGGAAGTT GGGAAGGAAA AACTGGACAC 000160 000161 GTGAGCCTGC ATATCTCCAT ATCTtctttt tctctctttc tccctcatcc tctcactgtc taactctcat gttcccttcc 000240 000241 tctctttGTA TTGCCTATAG AATGTAAATC CTCCCAGATG ACCTCTCTAT GCTATAAATT TTCAGCCCAC ATACTTGAAG 000320 000321 GTGtgagtca cattcttcaa aatgatcagc tgtagcaata ataaaggtga tattctgcct ccacctattt tgcttcttat 000400 000401 ttcagaactt gagtggggaa gaagggtgct atttattgac ttcctcaaga acttcaacTA TCTAATGCAT GGCTTGAAAC 000480 000481 AAATATAACC TTGCTTTCTG AGTGGAATGA AGTATTATCA ACACATATTT ACCTATATTT TATACTACTG TTTCGGTACT 000560 000561 TTCTTTTTTA A |
Predicted Small Protein
Name | NONHSAT008667_smProtein_341:487 |
Length | 49 |
Molecular weight | 5601.6511 |
Aromaticity | 0.104166666667 |
Instability index | 56.9229166667 |
Isoelectric point | 7.93988037109 |
Runs | 10 |
Runs residual | 0.0427631578947 |
Runs probability | 0.020826709062 |
Amino acid sequence | MISCSNNKGDILPPPILLLISELEWGRRVLFIDFLKNFNYLMHGLKQI |
Secondary structure | LEELLLLLLLLLLLHHHHLHHHHHHLLEEEHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |