NONHSAT008663

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT008663

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2712 nt

Genomic location

chr1+:198860009..198862720

Exon number

1

Exons

198860009..198862720

Genome context

Sequence
000001 TATACATTGG AGCATTAAAA TAATATGAGA ATGCACAGTA TCTTCTGGTT ATCATAGGAA CATTTGAATA AAAGTGATCA 000080
000081 AACGCTTAAA CATAACACAG AATCAGTGTA ATAGAAAGAT ATTATAAATA CATTGCAAAA ATATTTTTAA CAAGAAGAGG 000160
000161 ATATTAGAAA TTAGAGTCAC TGAATACAAG GCATCAGAAA TCACTTAAGA TGAACTATTA AATTGTGTGT GATAGAAAAA 000240
000241 GAGAATAAAA AAAGAAAGAG AATAAGAGAG AGGAGATTGA GATTTAATCA CTATGAGTGT AAAATTCCAG AAGAAATAAT 000320
000321 TAAGCAAGGA GAAATATTAA ATTTAATTGG AAATTAGGTC AAATAAAAAT ATACAATGGA AAACTTTGCC ATATTTTAAA 000400
000401 AGAATGTAGG GAAGAGGGAA AACGGaaata aaaaataaaa ttataaacta aatcaaaatc ataattaatc atatttttGC 000480
000481 AGAGCTTTCC TGTGAATCAA AACAATCCTC AATCTGTTCT GTAGCAAGAC AGTTTAGTTT CTTGGAGATC ATTGGCAATC 000560
000561 ATTTTGATTA CCAAAGTAAT TGTAGGGCAG TACTAAAATC CATTTCATTC TTAATTTGAT GAACAAAAGA CACTAATGCT 000640
000641 CTTAAAATGA GAATAACAAT TATTTGTAGC CATTTCAAAG ATAAATTTGC AGTAAATCAA TCCAGCAGTC ATCCCTTTGA 000720
000721 TTATTTTTAA AGAATAAGAG AAATCTGAAT AAAAAATATA TAGATTTATC AGCTCAAAAA CACAAAATAA TTTTAGGCAT 000800
000801 TTGGTGACAC TAAAATGCAG TTAGATTTGC CCAACATTTA ATATTTCTGC TCTTCTTTTG GAGGTCTCGA TTTCTAGAAA 000880
000881 ATTAATAAGT ATCTGAAAAT CTCTGCTAAC AGAGGTGCTA CGTGGGCAAA TACAGAGCAG GATGATTCTC ACAATACTTA 000960
000961 CTTTCTAACT CAAATTAATT AATTCTCTTC CAATGATTTA AATAGGAGCA TATTTTTGGG TAAGTCTTCT TCCGTGTTGA 001040
001041 TCATTTGAGA AAATGATGGC AGAAGTGAGT ATGAGCAGAA TGAGGTTTAA TTCTCTAACA TACTACTCTA TATTTAAAAT 001120
001121 GATTAAATTT GGAATATGAT ATCATTAAGA GAAAGACAAC ATTAACACCT GTAAGTTGTT CAGATTGTGA CATGTTGTAC 001200
001201 ATTTGTGTAT AATTCCAAAA TGTGGTTGCC ACAAAATAAT GTGTTCACCA ATATCCAAGC TTTTTGAGCT GCCAGAAAAT 001280
001281 ATCAAAACAA TTGGTGCTCT TTGGAATGTG TAGTTAACTT CCTGCTAGGA GAGGAGTCAC AGCTGCTACA GTAGCAGTGG 001360
001361 GTTTCCAGAT GTCAAGGCTG TGAGGATAGT GAGGTAATTG CAGGAAGGAA GGGATACAAT TTTGTTATTA CAGATTACCC 001440
001441 TCCCCATTGA AATCTCTGGA TACAGCATTA GTATCAGTGC TTTGGATATG CACATTGTGA ACTGGAGGTC TTCATGTTGA 001520
001521 AGTGTAGAGG TCTGTGCATT TGCTTCAGTC GAAAAAGCTG AGCCAGGCTT ATTAAAATTT GTGGGAAACA GAGTAAATGC 001600
001601 TCTCAAAGCT GTATTATTGG ATTTATAAAG CATCCATAAG TGTTAATATG TTTTATCAGC AAAAGTTGGT TTTATAAGGA 001680
001681 CAATAACCAA ATAACAAAGT TTAGCTATAA ATGTTCCAGT ACTATAGCTC ATCCACTGAA TTAAGAGAAA ACAAAATGTT 001760
001761 TAGATACCGA TAAATTAATC AGCAAATCTG CTTAAGTCCT TCTTTGTATA CTAGTGACTG AGTAGAGGAA ACAGATGATG 001840
001841 ATTTTTCCAG TATTCAACCT AGAAGAATTT CTTTCTCAAC TTCCCATGCT ATGTAGTCAG AAGAGTACAA ATTACTGAAA 001920
001921 ACTCTGTTTT TCATTCAGAA GCTACAATCA TGGTGCCATA TTTCCATATG GGAATTTTAA ACACTACAGT ATTTTGACAT 002000
002001 ATTTTATTGT CAAAACCAAT ACATATTTGT CCACACAAAT TAAATTGAAA TTAATTGAAG AAATTCAGTT TGATAATTTC 002080
002081 TGGTGTTTTT TTTTTTCTGT TGAGGGGTCT GTATTACTTA TTGTACTGAA TGTACATATT AGCTTAAGTT TCTCTGTAAA 002160
002161 TGAATGAAAT AATTGGTGCA TTAGTTTCAC CTAAAACAGG CAGGGTTGAG GATATTCTGA GACTTATGTG AAGTTGACAA 002240
002241 TTCTGGATTC ATTCTACCAG CCATGAAGAG AGAGACTTCT CATCTCACTC ATAACAGATa caccatcctc tgctgaaact 002320
002321 ctaagctttt catagttttt gagggcagtt acatatcact attgaatcac actgagctat tcatggtcaa ctaatagcca 002400
002401 aaagtcccat gtgccattct tatttcatgt ctcccacatt ctatggaatt ttgaagttaa ggctagaact ttatgcctgt 002480
002481 cttgctaaac ctgacctATT ATATCTGACT AAGGCACACT GGATTGTACA ATTCCAGAGA GTGCCATTCC TATCATTAAC 002560
002561 TCATAAGTGT TCTTTCTGAA GTTACACAGC CTCTATGGCC GCAGGTGGCC TTGTCTACCT TTGAATTTTG CTTTTAAATC 002640
002641 ATGGATAATT TATTCACTAC AGCAGATGTC CTCTAGTTTA ATTAATAATA TACCTTAAAT TTAATAGAAT CC
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Predicted Small Protein

Name NONHSAT008663_smProtein_2408:2578
Length 57
Molecular weight 6670.9507
Aromaticity 0.178571428571
Instability index 59.2108928571
Isoelectric point 9.21844482422
Runs 8
Runs residual 0.0104410616706
Runs probability 0.0441397279632
Amino acid sequence MCHSYFMSPTFYGILKLRLELYACLAKPDLLYLTKAHWIVQFQRVPFLSLTHKCSF
Secondary structure LLLLLLLLLLHHHHHHHHHHHHHHHLLLLHHHHHHHLHHHHEEELLLLLLLLLLLL
PRMN -
PiMo -