NONHSAT008563
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008563 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
764 nt |
Genomic location |
chr1+:193202156..193220298 |
Exon number |
3 |
Exons |
193202156..193202284,193218860..193219001,193219806..193220298 |
Genome context |
|
Sequence |
000001 TTGTCAACGA GAAAATGAAA CTCTAATACA AAGAAGAAAA GACCAGATGC AACCAGGGGG CACTGCAATT AGTGTTACAG 000080
000081 TACCTTATAG AGTAGTAGAC CAGCCCCTTA AACTTATGCC TCAAGACTGT TAAAGCCTTC CATCTGAAGT ATGATGAAGT 000160 000161 TCGTCTGGAT CCAAATGTTC AGAAATGGGA TGTAACAGTA TTAGAACTCA GCTATCACAA ACGTCATTTG GATAGACCAG 000240 000241 TGTTCTTACG GTTTTGGGAA ACATTGGACA GGTACATGGT AAAGCATAAA TCGCACTTGA GATTCTGAAT TATTTGGCTC 000320 000321 CTCCATTTCT GGAAATTGAG ACTCAAGCTT TATGAATTTA TCAAGAACTT AAAAATGAAG AAGGTCACAG ATTGATCTTT 000400 000401 TATAAGACCT TATTTGATGC TTTGTGCTTC AAGGAGATGA TACCTGTCAT CCATATAAGC AAACTTTTTG GCTTACAACT 000480 000481 ATTTTTTTAA TATTAGCCTT CTAGTCTGTA ATGGAAATTG TATATTTTGA TAGAAGTTTT TTCTCCATTG GTTAAATTAG 000560 000561 CATTACTTAA AATTTGTTTC TTTAGAAAAT AAATGCAGGT TATAAATGTG TGTATATTTA GAGATTATAA GGCTCTCTGA 000640 000641 GCCATCTTCT GATTTTTCAT TGCTCTATAA TTCTTTTTAC TGAAAATACT ATGTTATGAA TGGTATTAAA TTTTAGTCTC 000720 000721 TGGAACATCC AAAACCAAGC AAAGGGATGT GACTATTTTG AATG |
Predicted Small Protein
Name | NONHSAT008563_smProtein_605:682 |
Length | 26 |
Molecular weight | 2990.4034 |
Aromaticity | 0.2 |
Instability index | 52.1124 |
Isoelectric point | 4.13690185547 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0490902667374 |
Amino acid sequence | MCVYLEIIRLSEPSSDFSLLYNSFY |
Secondary structure | LEEEEEEEELLLLLLLLHHHHHLLL |
PRMN | - |
PiMo | - |