NONHSAT007391

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT007391

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4691 nt

Genomic location

chr1+:167388164..167393980

Exon number

5

Exons

167388164..167388795,167389510..167390230,167390396..167390550,167390614..167390991,167391176..167393980

Genome context

Sequence
000001 TCTTTTTTTA CTTATTTAAA AATAAGTTGT GAAATGAAAG GTACATTTAC ACATGTACAC ACGAAACACT AATATAGCTT 000080
000081 TTTGGTGGTT GTTTAGTTTA AAATCAACTC CCTATCCATC ATCCCTAGAT ATTCTACTTA TCGTATTGCT TCATGAACAC 000160
000161 CTTAGTCATT TTTTACTTTA CGTATATATT TTTTTATCAT CTCAAGAAAT GCATTTTGAA TTGAATGAAC TATCTTCTAA 000240
000241 GCTAAGATAC TCAAATTTAA CTTTTAGCCA CCTTATATGG GAGAGCCTGG AAACTAAAGG GGACCAGGGA CCATTTGACC 000320
000321 AAAAGAGGTG TTTGGTGGAG TTTCTGCATT TCAAAGAAGA AAGGCCAGAT AGGTCATCAC AATTCATTGT ATTATTCTTT 000400
000401 TTTTTTCCCC TTAATGTTTA TGCAAATTTT ATTTTATATT TCTGAATTTG GTTAGCACAT ACTAAGCCAA AGACTATTCT 000480
000481 AAATGCATTT ATAGTGAATA CTATGTATGC CCATGGTAAT GGGTCCTCCC TAAGGAGTGG TGAATGTAAT TGTGTGAATC 000560
000561 CTGCTTATCA CAAGTGGTGC AATTTGGTCA TAAACTTTAT TTATACCCTG TATACATCTG AATAACAGAG CACCTGCTTC 000640
000641 AGCCTCCCAA GTAGCTGGGA TTACAGGCGC CCACCACCGC ACCCGGCTAA TTTTTGTATT TTTAGTAGGG ACGGGATTTC 000720
000721 TCCGTGTTGG CCAGGCTTTT TGAACTCCTG ACCTTAGGTG ATCTGCCTGC CTTGGCCTCC CAAAGTGCTG GGATTACAGG 000800
000801 TATGAGCCAC TGTGCCCATC CTCATGTCAA TTTTTAAAGT GATAAATCCT GATATTATAC ATTGCAATTA GTGTAGAATA 000880
000881 AACGCTTGGC TTATAGAACT CTCTGTTCTT AGTCTAAAGC TGTTCCCAAA CCAGGTCATC CTCACGAAAC ATTCTTGACC 000960
000961 AAGAAAAAAG ATAAGGTCAT TGAGATAGGA AGACAGAGGA AAAGCCTCTT GCTGTTGTTT CTTCCCAAGA AAGGAGAAGC 001040
001041 CCTGCCAGGG AGAAGTCAGT AGTATTGCTG ACTCACTGTA TCACTGAGTG TAGGGTGTGG TAGCAAGGAG GAGGCAGGGG 001120
001121 ATTCACGCTG ACAGGTGGCT CTGGCCTGGC TCTTGGGGGG CCTTCTGAAG ACCAGTCTGC AGTTTGAGGA AGGGCCCCAA 001200
001201 CAATTCATTT GGAGAGCTTG GCCAAATACT TTCTCATTAA ATCAGCACCT AAACTTGATG AACTTAAAGT TTGTTTATTA 001280
001281 GAGTTGAAAA CATTAAAAGA TGACTGATAC TAATGGGAGA AAAATACTAA AGACCCAAAA TTTAAAATTT TCCTCTTTCT 001360
001361 CAGCGTTTAC AAACTTGGCT TTTGAGAAGG GAAAAATCCT CTTTGCTATT TCTGTAAGAA GAATAACTGA GATCAGCTAT 001440
001441 TATATAGGTT TGCATGGATG GTGTCCACAA TACAAATGTA AACTTGGACA GGAATAGGAT AAATAAATAC CCCTGAGATT 001520
001521 TCCAGTAAGG TATTTGAAAG GATTCCACTG GGAGGGCAGG GAATATATTT TTTCTCAGAG CATCCAGTTT GTACCCAGTT 001600
001601 TTCTATATGG TTTGTGAACT GTAGCTTTTA AAAAAAAATT TTGTAGTTTT CTTCTAACCT TATTCATTAA GTAGTTCCTT 001680
001681 GTTTTGGCCC TTCTACTCTT GGCCTTAGCT AAAAGCAGTA AATGTGAGTG AATTTTATGT TGATTATGTC ACCTGGATCT 001760
001761 CCTTTCCTTC CCTTCTTTTT CTCATTGAAT GGTGGTACCT TAATTTGGGT AACAGCTAGC TTCTGGCACC TTCATAAAAT 001840
001841 ACCTCAGAAT AGCTTAGCAT TGTTGCAAAA CTGGTTTTAA ACTAAATATG TTAGAAGGAA AACATTGCTC GTGTGTGTGT 001920
001921 TTGTTTTTTC TTATATCTGT CTTGCCAAAG GAAACTTGAT TTTCCCTGTG ATTGGCTTTG GCCTCTGTGG TCTGGTCTGC 002000
002001 AGCAGTGTGT GGTGGCATGC AGGTAACATA TGGGGTGTCC AGTAGGTTCA GGGACCCTGA GGGTGCATTT ACATCCCTTC 002080
002081 CTATGGTTGC CCATGCCCCC CAGACCCTGC CAACCTCTCC TAATGATTCA TTACCTCTGT ACATAGCAAA AGCATAGGCA 002160
002161 AAGGATGAAT GCGTGAATGC CTGGATGTGC AGTTGAGAAA CAGAGGCAGA CATAGACATG CACCAATTAA TTTGGAGCCA 002240
002241 AGAGGTGAGT GATTGATGTA TCTTAAATCT AGGAAAGTTA AAGTGAAACA GGTTCTTTGT GTTGCCCTCT GTCAAGTTAC 002320
002321 TGAATGTTGT GCTAATAACA CAACACTTTA AAACCTTACT TACTTTTCTC ATACCAAGGC TAGTTCTTTC TAGACCAAAA 002400
002401 ACACAAACAG GATAAAAAGC AAACCAAGAA GTTGAAAGCT AACCTGCCCA CCTCACCCCT GTGATACAAA GTGTGAACCT 002480
002481 TAAGGATTAG TTGGTGGGAT TGAGGAGAGA ATTATTCTTG GTGGGAACAT GAATGAGAAA TGATGCTGGC TTAGGAAAAA 002560
002561 TCACAAGCCC TTTCTGCCCA TACTCTGGGA CAAACTTTCT TGGCTCCCTG AGTTCGGATA TAGACTGTAT CTCTAGAAAG 002640
002641 GCTATTTTTT TAAATAAATG ATCCCACAGA ACTTAAGTGG GATTTGGTTT AGATACCAAA GACACTGCTA ATGTCATTGC 002720
002721 TTATCCTTAA GTTTTCAAAA CAGGCAGAGG GAATAGGAGC AAAAAGCCAA AATTTGGAAA AGCTTTACTT TATCTCTTTC 002800
002801 CTTCCCTTTT CCCCTTTTCC CAGTCCCCTG CTTTTTGAAG GAAGTCTTCT TGGTTATCCT GGCTTTGGAA AAGAGATTTA 002880
002881 TTTTGTTTTG CTCTGCTGGC TCTTTAAAGA TGGATAGTTG CTCAATCTAG CAGTGATGTT CTTGGAATTG CTGAGAAATT 002960
002961 TGGGGAGGGC AAAAGATAGG GGTAGAATTT TTTCATTATT TCCCTTTATC TAATACTTTT AAATAGAACC AACACAGCCT 003040
003041 ATATGAGTTC AGACAATATT TAGATGTGGT ATCTCCATCT GTCTCCTGTA AAAGATAAGA ATTTTCAAGA ACAGGATTAC 003120
003121 GTGGAAAACC AAAAGATCTT CCCTTACTCT CCTATAAATG TTTTGTTCCA AATGTTTTTA TATATGGGCT CTAGGGAGTC 003200
003201 AGGTAGTTCA TTGTTTCGGT GTACTATTGA TAGGACACAG AAAGGGAGAG AGGGTAAAGA AATGTATCAC TCTCTGAATA 003280
003281 TTGCATCAAA AATGATTAGG TTGCAGAACT TCATGAAAGC TTTACTAATA ATCTTATTGT TCTGACATTA TGTAAAGGTG 003360
003361 GTATTAATAT TGTATGACTT GTCAAAGTGC TAGATAGGTT TATAAGTAGG TAATAGGGAT GTTGAAGATT AGAGCACTTG 003440
003441 AAACAGAAGT TCTGGGAAAA CAAGGTGTGT GTAATGGAAC ACCACTTTGA GCACAGAAAC AAAGGTCCCT TGGACCTGGT 003520
003521 AGGGAAGATG TGATTTATGA TTGTTTCTGT GTCCCTGTAT CTGCCCACCC TGCACAGGGC TCCACCACCC AGGGCCACCT 003600
003601 TCTGGTTTAA ACCCAGGACA CTGTCAAAAA GTTAAGACCC CAAAACTAAT TTACTGTAAA AAACATTGAG GACTGCTGCA 003680
003681 AAGTTTTCCC TTGTTTTCTT TGTGTACTTG TTCATCATTG TATAAGTTAG CCACAGCTTC ACAAGAGCAG CTTAAGGCTT 003760
003761 CTTTCATAAA TTGGCAGTGG CATTGAGTTC TCAAACATTA TATCCCAAAG TCTGCAGGCA GACAGCTGGA TACAGCGCTG 003840
003841 TGTATAAATG AGACGTCCAA ACACTTGAGT TTCTTAAGAT TGGGATCTCT TTCAAATGAA AAAGGACAGA GCCAAGTAGA 003920
003921 GAAAAGACTT TGTGCTCCCA CCCAGCCTTA ATGAGTCTCA TGGTCTAAAA GTATAGGAAG AAATGAAATG CACTTTCAGA 004000
004001 AGCTAAAATG ACAGTGTCTG CTACAAAAGG CTGTAGTTGT AGGCAGTCGG GGATGCCATG TCCTTGGTTC CATTCCTGCG 004080
004081 TGAGTCTGCA GAAGGCACAC ACTTTGTAAG AGTAGAGTGG ACTAGTGCCA GCCTGAATAG GTTTAAAACT GCAAACAGTT 004160
004161 GGAGAACATG GAACAGGTTG GTGCAGGAAG CCTAAGATTT TGCAATCATA TTATAACATT GGCTTTTGAC AACATAAATG 004240
004241 TTGTATCTTC CCTAAGGTCA GGTCGGGGAA AGAAAGACTT CCAGCTTCTT ACCTCTGCGT GCATGGGCAC GTGTGCATTG 004320
004321 CTCAGTCCGC AGGAGGTCTC ACTCCGCAGG AAACGCTCTC CTCCCGCATA AGTCTGTACT TCCATCCCCT CATCTGTGGT 004400
004401 AGTAGTGAAG GCTAGGTGAG TAAGCGTGGG CTGTTCTACC CACCAGAAGT CCAGGAGCTG TTGTATACCT CATTTCTAAC 004480
004481 TCGTGACCGA GTGACTTGCT TTAACTTTCT CGAAATCCTA CAGAGTTGCC AAGTCTGCCC TCCCTCCTCA GTCATGTTAA 004560
004561 ACTCTGGCCT ATAGCATCAT GGGACCTGTA GCCTAGGGTG GGACCCCCTA AAGCCTCTGA ATGTCGCTGC TTAAAAGCTA 004640
004641 CTGCAAACTG AGGGCAAATT GCAATCTTCT ATTCCTTTTT GTTGCAAGGG G
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Predicted Small Protein

Name NONHSAT007391_smProtein_1736:1879
Length 48
Molecular weight 5406.3263
Aromaticity 0.191489361702
Instability index 60.6212765957
Isoelectric point 8.54010009766
Runs 10
Runs residual 0.0464893617021
Runs probability 0.045354177707
Amino acid sequence MLIMSPGSPFLPFFFSLNGGTLIWVTASFWHLHKIPQNSLALLQNWF
Secondary structure LEEELLLLLLLLEEEELLLLEEEEHHHHHHHHHLLLHHHHHHHHHLL
PRMN LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii