NONHSAT007283

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT007283

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1864 nt

Genomic location

chr1+:164595273..164651720

Exon number

5

Exons

164595273..164595333,164610266..164611430,164611930..164612066,164643727..164644053,164651547..164651720

Genome context

Sequence
000001 AACCCCGTTA CCCCCCAGCC CACACACCAC CACCCCAGTT TTGGGTGGGG AGAAGGCAAA GGGAGAGATC ATCTCTCAAA 000080
000081 AAGCTCCCAT CAGAGCAACC ATTCTGGGAC TTTGAGCAGA ATGCTTAAGG CAGTGGTTCT AAAATTCCAC ACCACCTGTT 000160
000161 CTTCCAGTTG TGTCCTCTCT GAGCTGCCTC TGACGGTCAC ATTCCATGGC CATGTGCCAC AGCAGACTTG TGATACTGAT 000240
000241 TTTAGTGTTG TCCTTGGCCA TTGGGGGAAG GGAGGAAGGA GAGAGAAGAG AAGGGGAGAG AAGAAGAGAA ATGGGAGTGG 000320
000321 GGTCCATTCA TCCATCTCTC TTGTCATTAG GGGCCCAGCA GTTCCCACTA TGGTACCTAG GAAACTAGCT TGGACCTGGA 000400
000401 GGCCATCCAG TGACCTAGTC TGGGCCAGTA AAGCCACCAG GCCATTTTCC TGCTTCGGAC ATGCTTTCTC AGCTGCCCTC 000480
000481 CCCCTTAGCT AAGGCTGAAA TGACTCATCT TCCCGTGCCC TAGTTCCACG GGGTTTCATC TCTGTGACTC GGGACAGAGG 000560
000561 CCTTGGTTGC CACCAAAGGC AGCTTATGGT GTAGCTTCAG GTCTGGCCTG ACTCAGTGGC CTTCCCTCAG CTATTCACTA 000640
000641 CAGAGGCAGT TAATGAAGAA GACACAAGGG TAGCAGGCCT GAGGGATAAC TTCAAGGCTA ACGTGTCTTT TTTCCAGTAC 000720
000721 TTACTCTTCT TTTGAATTTT AAGAATTCCA GATTTTATTC TAAGTCAGAG AATACTGTGA GAAAGGATTT TATTGTATCC 000800
000801 ACTCTCTCCA AATGGTGTGA ACATCTGGAT TTGCATCCTT CCCATGACAG ATATCACAAA TTGGGTTGGG TTTTGCATGC 000880
000881 TGAGGATGAT TTTTGGTATT CAGCTAACAC CCTTCCTTTA AGGAAGTTAG AACACTTGAT AAATTTTAAG CTTTTGATCC 000960
000961 TCAGTAGTAC CCCTGGAAAA TTAAGGTCCA GTGAGGTAAA TTGTCTTGAT TAATTATATG ACATGCACTG CTTTTTGGTG 001040
001041 GCTCTTTTGT TGTGTTTTGT TTTTTCTTTC TCCTTCATTT TGTTAAAATG AATTATGTGA ATGTCCAGGT TAGCAGTGTT 001120
001121 CTATTTTCAT AGGATAAGCC CCATCTCTAG TACTGTTTAT TTCCATTGTG CCTATTTTTC AGGGAACTCT GTGCATTTCC 001200
001201 ACATTTCCAT CACCAGCTCT AAGAAGAAAA TAGAAAATGA GATATTAGAA GGAAATAGAA CAAAAACTAT TTGCCTTCAA 001280
001281 GGAGCTCACA GTCTAGTTCT GGAGACTGGA CATAAGCAGT CTCTGCTCTC TGCTTGGACT GGTGTCACTG TGATCATTCT 001360
001361 AAGTTACAGA GACAGTTGAC GGCTTTGGAG TGAAAGCTAG GAGCCAAGGA GTCCTGAGAA AACTATAAAT GGGCATGGAA 001440
001441 TGTCCTGGAT AATTCTGTGG TGGGGAAATT AATTCTGAAC CACTAAGTAC TATTAAGAAG CTGATGCCAA CTAAATAGGC 001520
001521 AGAAATTTTT ACAAAAGCTG CCAGAGTTTA GAAACCACCC AGTGTGCCAT AGCTTCAGGG GAGCAAAACT ACCCACTCTA 001600
001601 CCAAGTTGGA AAAAATGAAG AATGCTTCAA ACTGAATCCA GCTGATCCTG GAGGCCACTG ACCCTGTCCT AATGGAGACA 001680
001681 AAAAGTGACA GTATTTCGAA AAAAGCCTGG TTTTGGTACA GCTCTTCCAG AACCCACGGG AAGAACCTGT TCATCAGCTC 001760
001761 ATCCATCCGT CTGCTGAGTA AATGCTTATT GAGCATCTAC TGAATGCCAG CACTGTTCTT TGTTCTTGGA ATACATCAGT 001840
001841 AAACAAAATA AGGAAAACAA AACC
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Predicted Small Protein

Name NONHSAT007283_smProtein_1100:1378
Length 93
Molecular weight 10360.7765
Aromaticity 0.108695652174
Instability index 49.9490217391
Isoelectric point 9.34259033203
Runs 17
Runs residual 0.0495777291211
Runs probability 0.0456425283415
Amino acid sequence MSRLAVFYFHRISPISSTVYFHCAYFSGNSVHFHISITSSKKKIENEILEGNRTKTICLQ
GAHSLVLETGHKQSLLSAWTGVTVIILSYRDS
Secondary structure LLEEEEEEEEEELLLEEEEEEEEEEELLLEEEEEEEEELLLLLLHHHHHLLLLEEEEEEL
LLLEEEELLLLHHHHHHHHLLLEEEEEEEELL
PRMN -
PiMo -