NONHSAT007213
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT007213 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
924 nt |
Genomic location |
chr1-:162137792..162144994 |
Exon number |
2 |
Exons |
162137792..162138268,162144548..162144994 |
Genome context |
|
Sequence |
000001 ctctgtaagt gcatgtaagt gcagaccatg cataacgact tttttttttt tccccaaaaa gtacttcatg gaaagaaaaa 000080
000081 cagtaacttt acaaatacta tctcaagcca ggtgatcaag gttaacatca acagtgataa gtcataatga tagtatgtac 000160 000161 ccttcaaatt atatgatgag aatgccatct tacctctctg tcttcctccc aaaaacatat taaccatgag gaaaacatca 000240 000241 aattccagtt aaaggagatt ctacaaaata ggcctgacca gtaatcttca aaattgtgaa gatcaccaaa attgtcaaga 000320 000321 tcaccaaaaa tctgaaaaac agtcacagtc caggggagcc taaggaggat aagaactaaa tgtggtccca gacaagatcc 000400 000401 tggaacagaa aatgaacact aagggaaaac taaggaaata tgaacaaCTG TAGCAGCTGA TGTCACAAAG CCTGGCTGAG 000480 000481 GACCAAAGAG AAACAGGTTC GTTTGGAAGT TCGTATCTGA GCAGACTGGC TCAACCAGAA GTCCAGAAAA GTGTGGACCA 000560 000561 GCTTCAACAG GACAGCACTA ACACAGACTA CTGCAGTCTC TGCACAGAGA GGCCTAAAGG AGAGGTCACA GCAGTACTCT 000640 000641 GCAGGTAACA CTCCATTTCC AACGAGCAGA GAATCCCAAA GGAGGTGATT TAGTGATGAT CTCCATCAGC CCTAGAGAGG 000720 000721 GATCGTCGTG GTCAGGAGAC CCAGTTTTAG AGCCCGAATC CTGGCCATTC ATTGCCTATG TGACCAGGTT ACTGAATCTC 000800 000801 CTcttcataa agtaattatg aggattcagt gagttgctac aggcaaaacg cttagaacag cgcctgttat ataacaaCTA 000880 000881 ACATCAATGT AGACTTGCTA TTTTCACTGG TATTTTTTTT TTTT |
Predicted Small Protein
Name | NONHSAT007213_smProtein_695:814 |
Length | 40 |
Molecular weight | 4450.117 |
Aromaticity | 0.128205128205 |
Instability index | 43.8717948718 |
Isoelectric point | 4.86785888672 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.015015015015 |
Amino acid sequence | MISISPREGSSWSGDPVLEPESWPFIAYVTRLLNLLFIK |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |