NONHSAT007139
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007139 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
562 nt |
Genomic location |
chr1+:161185024..161189038 |
Exon number |
4 |
Exons |
161185024..161185160,161188031..161188066,161188493..161188513,161188671..161189038 |
Genome context |
|
Sequence |
000001 GGCAGGAAGA GGGGGACTCT GTGGTCAGGG AACTGCTCGC TGAGCACAGC TGCACAGTGC TGTCAGAACG GCCGATCTCC 000080
000081 AGCCCAAGAT GATTCCAGCA GTGGTCTTGC TCTTACTCCT TTTGGTTGAA CAAGCAGATC CAAGTGCGAA AGGCAGCTAT 000160 000161 AACCAGCTAT GAGAAATCAG ATGGTGTTTA CACGGGCCTG AGCACCAGGA ACCAGGAGAC TTACGAGACT CTGAAGCATG 000240 000241 AGAAACCACC ACAGTAGCTT TAGAATAGAT GCGGTCATAT TCTTCTTTGG CTTCTGGTTC TTCCAGCCCT CATGGTTGGC 000320 000321 ATCACATATG CCTGCATGCC ATTAACACCA GCTGGCCCTA CCCCTATAAT GATCCTGTGT CCTAAATTAA TATACACCAG 000400 000401 TGGTTCCTCC TCCCTGTTAA AGACTAATGC TCAGATGCTG TTTACGGATA TTTATATTCT AGTCTCACTC TCTTGTCCCA 000480 000481 CCCTTCTTCT CTTCCCCATT CCCAACTCCA GCTAAAATAT GGGAAGGGAG AACCCCCAAT AAAACTGCCA TGGACTGGAC 000560 000561 TC |
Predicted Small Protein
Name | NONHSAT007139_smProtein_311:514 |
Length | 68 |
Molecular weight | 7164.6153 |
Aromaticity | 0.0746268656716 |
Instability index | 53.0955223881 |
Isoelectric point | 7.69781494141 |
Runs | 13 |
Runs residual | 0.0507150113308 |
Runs probability | 0.0652983300044 |
Amino acid sequence | MVGITYACMPLTPAGPTPIMILCPKLIYTSGSSSLLKTNAQMLFTDIYILVSLSCPTLLL FPIPNSS |
Secondary structure | LEEEEELLLLLLLLLLLEEEEELLLEEEELLLHHHHHHHHHHHHHLEEEEEELLLLLEEE EELLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHL LLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiTTTTTTTTTTTTTTTTTTo ooooooo |